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  5. GSVIVT01023455001

GSVIVT01023455001


Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 224.5) & Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia


Gene families : OG0000436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000436_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01023455001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00131000 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AT5G20940 No alias Glycosyl hydrolase family protein 0.04 OrthoFinder output from all 47 species
Adi_g009193 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46287 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47838 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10747 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s1035.g095886 No alias EC_3.2 glycosylase & original description: CDS=217-2184 0.03 OrthoFinder output from all 47 species
Azfi_s1903.g107957 No alias EC_3.2 glycosylase & original description: CDS=887-1975 0.03 OrthoFinder output from all 47 species
Cba_g13685 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g60114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g02846 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24440 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28794 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24797 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037543001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.05 OrthoFinder output from all 47 species
Gb_34627 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
LOC_Os03g53790.1 LOC_Os03g53790 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Len_g46571 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
MA_10429527g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
MA_719501g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
Mp1g11940.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Mp4g13480.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Nbi_g29758 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15723 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22403 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42137 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c4_23400V3.1 Pp3c4_23400 Glycosyl hydrolase family protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012087 No alias EC_3.2 glycosylase & original description: CDS=236-2119 0.04 OrthoFinder output from all 47 species
Solyc04g015560.4.1 Solyc04g015560 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Solyc06g073750.4.1 Solyc06g073750 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species
Spa_g07447 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03456 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19085 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012037_P001 Zm00001e012037 Enzyme classification.EC_3 hydrolases.EC_3.2... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 4 280
IPR002772 Glyco_hydro_3_C 317 526
No external refs found!