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  5. GSVIVT01022926001

GSVIVT01022926001


Description : Uncharacterized protein At1g10890 OS=Arabidopsis thaliana


Gene families : OG0002396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022926001
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Als_g22454 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g24923 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G048300.1 Ceric.06G048300 not classified & original description: pacid=50620174... 0.04 OrthoFinder output from all 47 species
Dac_g07501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_27452 No alias Uncharacterized protein At1g10890 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_120059g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g10703 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024181_P001 Zm00001e024181 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR033371 ARGLU1 120 275
No external refs found!