GSVIVT01022139001


No description available


Gene families : OG0002247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002247_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022139001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00030440 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AT3G50370 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.2 OrthoFinder output from all 47 species
Adi_g017190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060558 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g078021 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g04200 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ala_g11352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11493 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Als_g21096 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g33206 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000892 No alias not classified & original description: CDS=309-7646 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012042 No alias not classified & original description: CDS=1-7353 0.05 OrthoFinder output from all 47 species
Cba_g04098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12981 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G046700.1 Ceric.27G046700 not classified & original description: pacid=50605982... 0.07 OrthoFinder output from all 47 species
Ceric.28G036600.1 Ceric.28G036600 not classified & original description: pacid=50570758... 0.05 OrthoFinder output from all 47 species
Ceric.30G074300.1 Ceric.30G074300 not classified & original description: pacid=50608333... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000981.30 No alias No description available 0.05 OrthoFinder output from all 47 species
Cre01.g013600 No alias No description available 0.04 OrthoFinder output from all 47 species
Dcu_g43331 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Dde_g10106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18184 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Gb_29158 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os03g27820.1 LOC_Os03g27820 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g21152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g22997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24408 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_10431352g0010 No alias no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Mp3g23710.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g32022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02514 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08425 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g18806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38199 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g41533 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g06165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013309 No alias not classified & original description: CDS=271-7029 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022955 No alias not classified & original description: CDS=1-6579 0.04 OrthoFinder output from all 47 species
Sam_g30189 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo440052 No alias No description available 0.09 OrthoFinder output from all 47 species
Solyc02g090760.4.1 Solyc02g090760 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Spa_g25842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001911_P001 Zm00001e001911 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA

No InterPro domains available for this sequence

No external refs found!