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  5. GSVIVT01021378001

GSVIVT01021378001


No description available


Gene families : OG0007166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021378001
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT5G46420 No alias 16S rRNA processing protein RimM family 0.04 OrthoFinder output from all 47 species
Adi_g088454 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g05000 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0177.g056109 No alias not classified & original description: CDS=67-2256 0.05 OrthoFinder output from all 47 species
Ceric.12G015500.1 Ceric.12G015500 not classified & original description: pacid=50602174... 0.06 OrthoFinder output from all 47 species
Cre03.g191950 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g12589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os05g49130.1 LOC_Os05g49130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g08769 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g13080.1 No alias UDP-N-acetylglucosamine pyrophosphorylase 0.05 OrthoFinder output from all 47 species
Ore_g30913 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g19178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26855 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g40528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032446_P002 Zm00001e032446 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
InterPro domains Description Start Stop
IPR027275 PRC-brl_dom 174 267
IPR002676 RimM_N 79 168
No external refs found!