1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01020920001

GSVIVT01020920001 (NOV)


Aliases : NOV

No description available


Gene families : OG0003078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003078_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020920001
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00174420 NOV,... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00048p00175550 NOV,... No description available 0.05 OrthoFinder output from all 47 species
AT4G13750 NOV Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase... 0.06 OrthoFinder output from all 47 species
Adi_g034994 NOV not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24125 NOV not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21599 NOV not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g03910 NOV not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29580 NOV not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36696 NOV not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene15058.t1 NOV, Aspi01Gene15058 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g15575 NOV not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G052400.1 NOV, Ceric.09G052400 not classified & original description: pacid=50587496... 0.05 OrthoFinder output from all 47 species
Cre14.g608150 NOV No description available 0.02 OrthoFinder output from all 47 species
Cre17.g697150 NOV No description available 0.04 OrthoFinder output from all 47 species
Dcu_g20260 NOV not classified & original description: none 0.13 OrthoFinder output from all 47 species
Ehy_g12851 NOV not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_08163 NOV no description available(sp|f4jts8|nov_arath : 1024.0) 0.11 OrthoFinder output from all 47 species
Lfl_g02477 NOV not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10435793g0010 NOV no description available(sp|f4jts8|nov_arath : 254.0) 0.05 OrthoFinder output from all 47 species
MA_113855g0010 NOV no description available(sp|f4jts8|nov_arath : 403.0) 0.05 OrthoFinder output from all 47 species
MA_15947g0010 NOV no description available(sp|f4jts8|nov_arath : 1101.0) 0.09 OrthoFinder output from all 47 species
Msp_g13664 NOV not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07613 NOV not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60911 NOV not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc09g092100.4.1 NOV, Solyc09g092100 no description available(sp|f4jts8|nov_arath : 1857.0) 0.04 OrthoFinder output from all 47 species
Spa_g26132 NOV not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006049_P003 NOV, Zm00001e006049 no description available(sp|f4jts8|nov_arath : 1638.0) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR024975 NOV_C 2268 2357
No external refs found!