Sequence Description Alias PCC hrr GSVIVT01033511001 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 OS=Arabidopsis thaliana SRCAP, PIE1, chr13 0.921010930189314 3 GSVIVT01011388001 RNA processing.RNA modification.rRNA/tRNA methylation.TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex.TRM732 component 0.9109842435004352 2 GSVIVT01038603001 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP2 component 0.9036408391210883 3 GSVIVT01017346001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component EMB33, SUS2, EMB177, EMB14 0.9021960669437012 9 GSVIVT01011157001 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Symplekin/Pta1 component ESP4 0.8987185876719648 7 GSVIVT01007885001 0.8883255499360886 11 GSVIVT01028685001 Chromatin modification-related protein EAF1 A OS=Arabidopsis thaliana 0.8874825011350781 7 GSVIVT01010769001 DExH-box ATP-dependent RNA helicase DExH12 OS=Arabidopsis thaliana emb1507 0.8872451148760041 8 GSVIVT01017824001 0.8853509911884089 17 GSVIVT01025470001 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease EMB80, EMB1275, DEK1, ATDEK1 0.8844757003848264 14 GSVIVT01015912001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP160 scaffold nucleoporin SAR1, ATNUP160, NUP160 0.881470367929943 18 GSVIVT01026952001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor CHA2, CHR2, BRM, ATBRM 0.874406242113604 12 GSVIVT01013494001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor 0.8726998967282856 22 GSVIVT01022867001 Protein modification.protein folding and quality control.N-glycan-dependent machinery.UGGT UDP-glucose glycoprotein glucosyltransferase EBS1, UGGT, PSL2 0.8718185002347343 15 GSVIVT01035901001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor PKL, GYM, CHR6, SSL2, CHD3 0.8704669618224091 40 GSVIVT01024418001 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO1 export karyopherin XPO1A, HIT2, ATCRM1, XPO1, ATXPO1 0.8683083606494068 16 GSVIVT01004716001 G2484-1, ATG2484-1 0.8679200778709891 17 GSVIVT01033181001 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC3/TTN7 component TTN7, SMC3 0.8658119059337673 28 GSVIVT01013976001 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP10 assembly factor 0.8649190468851643 19 GSVIVT01000835001 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.MAC7 component EMB2765 0.8647242850759995 20 GSVIVT01016590001 RNA biosynthesis.RNA polymerase II-dependent transcription.ELONGATOR transcription elongation complex.ELP1 component ABO1, ELO2 0.8615801311471202 21 GSVIVT01024104001 0.8613834989618581 22 GSVIVT01032923001 0.857195978937137 23 GSVIVT01012107001 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.8540589433162451 36 GSVIVT01010244001 Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana 0.852544910437044 25 GSVIVT01007917001 0.8523600959801233 26 GSVIVT01028343001 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC1/TTN8 component TTN8, ATSMC1, SMC1 0.8503466318779649 30 GSVIVT01001478001 0.8501903363233471 28 GSVIVT01036698001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin NUA, AtTPR 0.8494365236272361 45 GSVIVT01035479001 Cytoskeleton.microfilament network.myosin microfilament-based motor protein activities.class XI myosin XI-15, ATXI-I, XI-I 0.8493781679234121 67 GSVIVT01017972001 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.8488480044536006 41 GSVIVT01032069001 0.84848895679553 32 GSVIVT01005970001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B3 component 0.8481567056154052 34 GSVIVT01035014001 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii 0.8477021192136828 34 GSVIVT01037231001 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.8451237994326563 35 GSVIVT01012904001 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.bacterial elicitor response.non-canonical heterotrimeric G-protein complex.XLG atypical G-alpha component XLG3 0.8420302229109022 36 GSVIVT01037437001 RNA processing.RNA decay.exosome complex.associated co-factors.Nuclear Exosome Targeting (NEXT) activation complex.MTR4/HEN2 ATP-dependent RNA helicase 0.8405147265875375 37 GSVIVT01030649001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component SDG2, ATXR3 0.8402028828985537 39 GSVIVT01009199001 Cell cycle.cytokinesis.preprophase microtubule organization.SABRE microtubule orientation-stabilizing factor SAB 0.8394214251656097 39 GSVIVT01020162001 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.VIR regulatory component EMB2016 0.83838899277622 41 GSVIVT01016203001 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.KTF1/SPT5L auxilary silencing factor SPT5L, KTF1 0.8372394030947442 42 GSVIVT01009695001 0.8358684264505796 43 GSVIVT01019421001 0.8355661594509807 58 GSVIVT01023393001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad54-like group.ATRX chromatin remodeling factor CHR20, ATRX 0.8349286346994274 60 GSVIVT01030061001 0.8341200680693539 60 GSVIVT01001912001 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP23 0.833930668857712 47 GSVIVT01012173001 0.8332748443461669 48 GSVIVT01024062001 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component ATTOC132, TOC132 0.8326924181236198 50 GSVIVT01026933001 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED12 component CCT, CRP 0.8322263424041212 51 GSVIVT01028893001 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.MTB component EMB1691 0.8282080069533045 57 GSVIVT01023989001 0.8279793398028825 68 GSVIVT01009834001 Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis thaliana LDL3 0.8274610299648164 54 GSVIVT01016309001 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.PWR component 0.8273340995050316 55 GSVIVT01001899001 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease ATUBP5, UBP5, PDE323 0.8271438509768728 56 GSVIVT01024708001 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion.heavy chain 0.826562932474191 57 GSVIVT01010295001 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.maintenance and regulation.TNO1 tethering factor 0.8260871543616243 58 GSVIVT01007806001 0.8245254317533294 60 GSVIVT01034713001 DNA damage response.DNA repair mechanisms.base excision repair (BER).bifunctional DNA glycosylase/lyase (ROS1) DME 0.8245052338044222 62 GSVIVT01003951001 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Arabidopsis thaliana ALDH6B2 0.8237047433550085 64 GSVIVT01020301001 Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase MGO1, TOP1, TOP1ALPHA 0.82368709271592 72 GSVIVT01011661001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin NUP155 0.822859117184211 66 GSVIVT01029697001 ZW18 0.821992005921018 68 GSVIVT01019761001 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor 0.8207825438168825 70 GSVIVT01025195001 0.8203335795109639 80 GSVIVT01033231001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Ino80 chromatin remodeling factor ATINO80, INO80 0.8196709158234828 79 GSVIVT01013627001 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS3 CORVET-specific component 0.8194188558467306 73 GSVIVT01016889001 0.8171154625558332 75 GSVIVT01031879001 Protein modification.phosphorylation.atypical kinase families.PIKK kinase TOR 0.8170074292927347 76 GSVIVT01030055001 Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana 0.8167431754534658 77 GSVIVT01031115001 Lysine-specific demethylase JMJ25 OS=Arabidopsis thaliana 0.8164666653502148 79 GSVIVT01016344001 Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.816392732761045 80 GSVIVT01019359001 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TATA box-binding protein (TBP) regulation.TBP-associated factor (MOT1) BTAF1, RGD3, CHA16, ATBTAF1, CHR16 0.8154425815745355 93 GSVIVT01007911001 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thaliana ESP3, EMB2733 0.8148296243966476 82 GSVIVT01032131001 0.8146994043393099 83 GSVIVT01026340001 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.phosphorylation of eIF2-alpha.GCN1 kinase co-activator (ILITHYIA) ILA 0.8129259064234422 87 GSVIVT01011280001 Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana 0.812644519910498 88 GSVIVT01028157001 DUF724 domain-containing protein 3 OS=Arabidopsis thaliana 0.8116861072640533 89 GSVIVT01027351001 0.8114452527100512 90 GSVIVT01016794001 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.REA1 assembly factor (MDN1) 0.8114067867781612 91 GSVIVT01001911001 0.8102946677633455 95 GSVIVT01038553001 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor 0.8081710984306423 96 GSVIVT01038280001 Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana 0.8075950161369505 97 GSVIVT01000089001 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor ATALY2, ALY2 0.8075491920570546 98