1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01019826001

GSVIVT01019826001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0001080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001080_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019826001

Target Alias Description ECC score Gene Family Method Actions
Adi_g041124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21961 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25849 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31196 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03864 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06521 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g051040.4.1 Solyc05g051040 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 213 255
No external refs found!