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  5. GSVIVT01018924001

GSVIVT01018924001


Description : GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0006143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01018924001
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00203340 evm_27.TU.AmTr_v1... GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT5G66470 No alias RNA binding;GTP binding 0.04 OrthoFinder output from all 47 species
Ala_g22081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g009893 No alias not classified & original description: CDS=1-903 0.05 OrthoFinder output from all 47 species
Ceric.25G026200.1 Ceric.25G026200 not classified & original description: pacid=50594372... 0.04 OrthoFinder output from all 47 species
Dde_g10149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_05092 No alias GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os05g49220.1 LOC_Os05g49220 GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.15 OrthoFinder output from all 47 species
Len_g24707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_124092g0010 No alias GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Mp2g20310.1 No alias GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.08 OrthoFinder output from all 47 species
Nbi_g01964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo75698 No alias GTPase ERA1, chloroplastic OS=Zea mays 0.06 OrthoFinder output from all 47 species
Solyc02g077280.4.1 Solyc02g077280 GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004817 cysteine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR004044 KH_dom_type_2 225 302
IPR006073 GTP-bd 25 142
No external refs found!