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  5. GSVIVT01017974001

GSVIVT01017974001 (Psb27-H1, LPA19)


Aliases : Psb27-H1, LPA19

Description : Photosystem II D1 precursor processing protein PSB27-H2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0004638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004638_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017974001

Target Alias Description ECC score Gene Family Method Actions
AT1G05385 Psb27-H1, LPA19 photosystem II 11 kDa protein-related 0.03 OrthoFinder output from all 47 species
Adi_g021001 Psb27-H1, LPA19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021002 Psb27-H1, LPA19 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22474 Psb27-H1, LPA19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11340 Psb27-H1, LPA19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre02.g073850 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g22123 Psb27-H1, LPA19 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g34104 Psb27-H1, LPA19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g53640.1 Psb27-H1, LPA19,... Photosystem II D1 precursor processing protein PSB27-H2,... 0.11 OrthoFinder output from all 47 species
Ore_g08997 Psb27-H1, LPA19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30336 Psb27-H1, LPA19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11979 Psb27-H1, LPA19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g076030.4.1 Psb27-H1, LPA19,... Photosystem II D1 precursor processing protein PSB27-H2,... 0.1 OrthoFinder output from all 47 species
Zm00001e012045_P001 Psb27-H1, LPA19,... Photosystem II D1 precursor processing protein PSB27-H2,... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0010207 photosystem II assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
InterPro domains Description Start Stop
IPR025585 PSII_Pbs27 45 209
No external refs found!