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  5. GSVIVT01017301001

GSVIVT01017301001 (RBL1, ATRBL1)


Aliases : RBL1, ATRBL1

Description : Protein degradation.peptidase families.serine-type peptidase activities.Rhomboid protease


Gene families : OG0000668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01017301001
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00097470 RBL2, ATRBL2,... Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
AMTR_s00070p00195850 KOM,... Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
AMTR_s00104p00044730 RBL1, ATRBL1,... Protein degradation.peptidase families.serine-type... 0.18 OrthoFinder output from all 47 species
AT1G52580 RBL5, ATRBL5 RHOMBOID-like protein 5 0.09 OrthoFinder output from all 47 species
AT1G63120 RBL2, ATRBL2 RHOMBOID-like 2 0.07 OrthoFinder output from all 47 species
AT1G77860 KOM Rhomboid-related intramembrane serine protease family protein 0.03 OrthoFinder output from all 47 species
Adi_g059977 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05510 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02521 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07016.t1 RBL1, ATRBL1,... protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28631.t1 RBL1, ATRBL1,... protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G018300.1 RBL1, ATRBL1,... protease *(RBL) & original description: pacid=50636147... 0.03 OrthoFinder output from all 47 species
Ceric.13G071700.1 RBL1, ATRBL1,... protease *(RBL) & original description: pacid=50635382... 0.04 OrthoFinder output from all 47 species
Dac_g01551 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g20994 RBL1, ATRBL1 protease *(RBL) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g14749 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42772 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06691 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06776 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008957001 KOM Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01024943001 RBL1, ATRBL1 Protein degradation.peptidase families.serine-type... 0.01 OrthoFinder output from all 47 species
GSVIVT01034160001 RBL1, ATRBL1 Protein degradation.peptidase families.serine-type... 0.05 OrthoFinder output from all 47 species
LOC_Os01g05430.1 RBL1, ATRBL1,... protease (RBL) 0.03 OrthoFinder output from all 47 species
LOC_Os08g43320.1 RBL2, ATRBL2,... protease (RBL) 0.03 OrthoFinder output from all 47 species
LOC_Os10g37760.1 RBL2, ATRBL2,... protease (RBL) 0.05 OrthoFinder output from all 47 species
Len_g13142 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06970 RBL1, ATRBL1 protease *(RBL) & original description: none 0.05 OrthoFinder output from all 47 species
Mp6g05540.1 RBL1, ATRBL1 protease (RBL) 0.06 OrthoFinder output from all 47 species
Nbi_g00696 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09832 RBL1, ATRBL1 protease *(RBL) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g61050 RBL1, ATRBL1 protease *(RBL) & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010272 RBL1, ATRBL1 protease *(RBL) & original description: CDS=374-1408 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0227.g026354 RBL1, ATRBL1 protease *(RBL) & original description: CDS=1-1299 0.03 OrthoFinder output from all 47 species
Solyc06g005580.4.1 RBL1, ATRBL1,... protease (RBL) 0.15 OrthoFinder output from all 47 species
Tin_g02797 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14488 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002140_P002 RBL2, ATRBL2,... protease (RBL) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 106 248
No external refs found!