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  5. GSVIVT01016618001

GSVIVT01016618001 (PPL1)


Aliases : PPL1

Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.PPL1 protein


Gene families : OG0003647 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003647_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016618001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00145p00071320 PPL1,... Photosynthesis.photophosphorylation.photosystem... 0.1 OrthoFinder output from all 47 species
AMTR_s00145p00079180 PPL2,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.08 OrthoFinder output from all 47 species
AT2G39470 PPL2 PsbP-like protein 2 0.17 OrthoFinder output from all 47 species
AT3G55330 PPL1 PsbP-like protein 1 0.21 OrthoFinder output from all 47 species
Adi_g076540 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.08 OrthoFinder output from all 47 species
Aev_g29864 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.06 OrthoFinder output from all 47 species
Ala_g04081 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.06 OrthoFinder output from all 47 species
Als_g11514 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.1 OrthoFinder output from all 47 species
Aob_g02808 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.08 OrthoFinder output from all 47 species
Aop_g06457 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.07 OrthoFinder output from all 47 species
Aspi01Gene37483.t1 PPL1, Aspi01Gene37483 protein involved in PS-II repair *(PPL1) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0097.g043870 PPL1 not classified & original description: CDS=158-745 0.09 OrthoFinder output from all 47 species
Cba_g15551 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.07 OrthoFinder output from all 47 species
Ceric.07G044500.1 PPL1, Ceric.07G044500 protein involved in PS-II repair *(PPL1) & original... 0.13 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001366.19 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001408.6 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre12.g509050 PPL1 Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
Dcu_g14839 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.1 OrthoFinder output from all 47 species
Dde_g06569 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.09 OrthoFinder output from all 47 species
Ehy_g00499 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.06 OrthoFinder output from all 47 species
Gb_31653 PPL1 PPL1 protein involved in PS-II assembly 0.1 OrthoFinder output from all 47 species
LOC_Os03g17174.1 PPL2, LOC_Os03g17174 component PnsL1 of NDH lumen subcomplex L 0.04 OrthoFinder output from all 47 species
LOC_Os08g25900.1 PPL1, LOC_Os08g25900 PPL1 protein involved in PS-II assembly 0.12 OrthoFinder output from all 47 species
Len_g16123 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.07 OrthoFinder output from all 47 species
Len_g19518 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.05 OrthoFinder output from all 47 species
Len_g51098 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g09651 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.15 OrthoFinder output from all 47 species
MA_418221g0010 PPL1 PsbP-like protein 1, chloroplastic OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Mp2g21180.1 PPL1 PPL1 protein involved in PS-II assembly 0.14 OrthoFinder output from all 47 species
Msp_g03059 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.06 OrthoFinder output from all 47 species
Nbi_g06549 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.05 OrthoFinder output from all 47 species
Ore_g17939 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.04 OrthoFinder output from all 47 species
Ore_g32674 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.09 OrthoFinder output from all 47 species
Pir_g58458 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g10729 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.05 OrthoFinder output from all 47 species
Pp3c2_13270V3.1 PPL1, Pp3c2_13270 PsbP-like protein 1 0.03 OrthoFinder output from all 47 species
Ppi_g60381 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010051 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.05 OrthoFinder output from all 47 species
Sam_g16517 No alias protein involved in PS-II repair *(PPL1) & original... 0.05 OrthoFinder output from all 47 species
Sam_g16518 No alias protein involved in PS-II repair *(PPL1) & original... 0.02 OrthoFinder output from all 47 species
Smo139888 PPL1 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Smo164192 PPL1 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Solyc03g114930.3.1 PPL1, Solyc03g114930 PPL1 protein involved in PS-II assembly 0.21 OrthoFinder output from all 47 species
Solyc10g054420.2.1 PPL2, Solyc10g054420 component PnsL1 of NDH lumen subcomplex L 0.16 OrthoFinder output from all 47 species
Spa_g05043 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.08 OrthoFinder output from all 47 species
Tin_g16257 PPL1 protein involved in PS-II repair *(PPL1) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e001257_P001 PPL2, Zm00001e001257 component PnsL1 of NDH lumen subcomplex L 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 87 235
No external refs found!