- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana
Gene families : OG0000069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000069_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G80530 | No alias | Major facilitator superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G16660 | No alias | Major facilitator superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G39210 | No alias | Major facilitator superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g018210 | No alias | UMF23-type solute transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g33684 | No alias | UMF23-type solute transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g23386 | No alias | UMF23-type solute transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g20243 | No alias | UMF23-type solute transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene19925.t1 | Aspi01Gene19925 | UMF23-type solute transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene39642.t1 | Aspi01Gene39642 | UMF23-type solute transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene40218.t1 | Aspi01Gene40218 | UMF23-type solute transporter & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g32508 | No alias | UMF23-type solute transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g35186 | No alias | UMF23-type solute transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.04G037700.1 | Ceric.04G037700 | UMF23-type solute transporter & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.08G005600.1 | Ceric.08G005600 | UMF23-type solute transporter & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g10986 | No alias | UMF23-type solute transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008084001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g44070.1 | LOC_Os12g44070 | anion transporter (Fabaceae-N70) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g24853 | No alias | UMF23-type solute transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10816g0010 | No alias | anion transporter (Fabaceae-N70) | 0.04 | OrthoFinder output from all 47 species | |
| MA_387320g0010 | No alias | anion transporter (Fabaceae-N70) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15237 | No alias | UMF23-type solute transporter & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g09704 | No alias | UMF23-type solute transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g109760.3.1 | Solyc01g109760 | anion transporter (Fabaceae-N70) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g007340.3.1 | Solyc07g007340 | anion transporter (Fabaceae-N70) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g066330.2.1 | Solyc11g066330 | anion transporter (Fabaceae-N70) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g11114 | No alias | UMF23-type solute transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g52118 | No alias | UMF23-type solute transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g56826 | No alias | UMF23-type solute transporter & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e006027_P001 | Zm00001e006027 | anion transporter (Fabaceae-N70) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011367_P001 | Zm00001e011367 | anion transporter (Fabaceae-N70) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e040754_P003 | Zm00001e040754 | anion transporter (Fabaceae-N70) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | HCCA |
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006887 | exocytosis | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| BP | GO:0032940 | secretion by cell | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046903 | secretion | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| BP | GO:0140352 | export from cell | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| No external refs found! |