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  5. GSVIVT01016156001

GSVIVT01016156001


Description : Cell wall.hemicellulose.heteromannan.synthesis.mannan synthesis accessory protein


Gene families : OG0003025 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016156001
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT1G51630 No alias O-fucosyltransferase family protein 0.04 OrthoFinder output from all 47 species
AT3G21190 No alias O-fucosyltransferase family protein 0.04 OrthoFinder output from all 47 species
Adi_g014962 No alias mannan synthesis accessory protein *(MSR) & original... 0.02 OrthoFinder output from all 47 species
Ala_g01824 No alias mannan synthesis accessory protein *(MSR) & original... 0.07 OrthoFinder output from all 47 species
Als_g04935 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
Als_g23140 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
Als_g30862 No alias mannan synthesis accessory protein *(MSR) & original... 0.07 OrthoFinder output from all 47 species
Aob_g03269 No alias mannan synthesis accessory protein *(MSR) & original... 0.05 OrthoFinder output from all 47 species
Aop_g04728 No alias mannan synthesis accessory protein *(MSR) & original... 0.02 OrthoFinder output from all 47 species
Aop_g30274 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene56083.t1 Aspi01Gene56083 mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Dac_g12170 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Dac_g15452 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g06387 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
Dcu_g35690 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Dde_g21485 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06726 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08327 No alias mannan synthesis accessory protein *(MSR) & original... 0.09 OrthoFinder output from all 47 species
Ehy_g16299 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g20020 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01029274001 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.03 OrthoFinder output from all 47 species
Gb_29818 No alias mannan synthesis accessory protein 0.03 OrthoFinder output from all 47 species
Len_g16206 No alias mannan synthesis accessory protein *(MSR) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g02782 No alias mannan synthesis accessory protein *(MSR) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g06050 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
MA_24566g0010 No alias mannan synthesis accessory protein 0.04 OrthoFinder output from all 47 species
Msp_g05690 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Msp_g44602 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g02963 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g43787 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Pir_g10269 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Pir_g57055 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g18442 No alias mannan synthesis accessory protein *(MSR) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g33079 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Sam_g39163 No alias mannan synthesis accessory protein *(MSR) & original... 0.02 OrthoFinder output from all 47 species
Solyc06g063240.3.1 Solyc06g063240 mannan synthesis accessory protein 0.07 OrthoFinder output from all 47 species
Tin_g10286 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
Zm00001e034580_P001 Zm00001e034580 mannan synthesis accessory protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 105 376
No external refs found!