1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01016062001

GSVIVT01016062001


Description : Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica


Gene families : OG0005577 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005577_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016062001

Target Alias Description ECC score Gene Family Method Actions
AT1G73110 No alias P-loop containing nucleoside triphosphate hydrolases... 0.07 OrthoFinder output from all 47 species
Aev_g06596 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g06168 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g16206 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g09667 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g14641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72562.t1 Aspi01Gene72562 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0587.g078545 No alias not classified & original description: CDS=85-1572 0.03 OrthoFinder output from all 47 species
Cba_g13522 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G032500.1 Ceric.08G032500 not classified & original description: pacid=50638582... 0.11 OrthoFinder output from all 47 species
Dac_g14854 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g24022 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Dde_g18676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g56320.1 LOC_Os04g56320 Ribulose bisphosphate carboxylase/oxygenase activase 2,... 0.09 OrthoFinder output from all 47 species
Len_g50097 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Lfl_g04649 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10428784g0010 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.04 OrthoFinder output from all 47 species
Mp2g04090.1 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.08 OrthoFinder output from all 47 species
Msp_g02450 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g06629 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19785 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g07975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g58392 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g45761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020487 No alias not classified & original description: CDS=305-1777 0.04 OrthoFinder output from all 47 species
Sam_g29423 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g49192 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Smo82367 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.05 OrthoFinder output from all 47 species
Solyc03g117850.4.1 Solyc03g117850 Ribulose bisphosphate carboxylase/oxygenase activase,... 0.14 OrthoFinder output from all 47 species
Tin_g21285 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 177 319
No external refs found!