GSVIVT01015389001 (AT-HSFC1, HSFC1)

Aliases : AT-HSFC1, HSFC1

Description : RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01015389001

Target	Alias	Description	ECC score	Gene Family Method
AT4G11660	AT-HSFB2B, HSFB2B	winged-helix DNA-binding transcription factor family protein	0.01	OrthoFinder output from all 47 species
AT5G03720	HSFA3, AT-HSFA3	heat shock transcription factor A3	0.02	OrthoFinder output from all 47 species
Aspi01Gene45768.t1	HSFB4, SCZ,...	HSF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.16G045800.1	ATHSF1, HSF1,...	transcriptional regulator *(HsfA1) & original...	0.03	OrthoFinder output from all 47 species
Ceric.20G059100.1	ATHSF1, HSF1,...	transcriptional regulator *(HsfA1) & original...	0.02	OrthoFinder output from all 47 species
Ceric.29G078200.1	HSFB4, SCZ,...	HSF-type transcription factor & original description:...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000057.99	HSFA1B, ATHSF3,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
GSVIVT01002066001	AT-HSFB2A, HSFB2A	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
GSVIVT01021269001	HSF A4A, AT-HSFA4A	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
GSVIVT01033257001	AT-HSFB3, HSFB3	RNA biosynthesis.transcriptional activation.HSF (heat...	0.01	OrthoFinder output from all 47 species
Solyc02g078340.4.1	AT-HSFB2A,...	transcription factor (HSF)	0.05	OrthoFinder output from all 47 species
Solyc09g009100.4.1	HSFA3, AT-HSFA3,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Solyc09g082670.3.1	AT-HSFA6B,...	transcription factor (HSF)	0.05	OrthoFinder output from all 47 species
Solyc12g007070.2.1	AT-HSFC1, HSFC1,...	transcription factor (HSF)	0.11	OrthoFinder output from all 47 species
Zm00001e014583_P001	AT-HSFA5, HSFA5,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	12	101

External Links

No external refs found!

GSVIVT01015389001 (AT-HSFC1, HSFC1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation