GSVIVT01015242001


No description available


Gene families : OG0000406 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000406_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015242001
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00106850 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AMTR_s00003p00244140 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00010p00237800 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00036p00232910 evm_27.TU.AmTr_v1... No description available 0.09 OrthoFinder output from all 47 species
AT1G13340 No alias Regulator of Vps4 activity in the MVB pathway protein 0.03 OrthoFinder output from all 47 species
AT2G19710 No alias Regulator of Vps4 activity in the MVB pathway protein 0.06 OrthoFinder output from all 47 species
AT4G29440 No alias Regulator of Vps4 activity in the MVB pathway protein 0.05 OrthoFinder output from all 47 species
Ala_g02085 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.02 OrthoFinder output from all 47 species
Ala_g04603 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Ala_g18521 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Ala_g33803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05729 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.04 OrthoFinder output from all 47 species
Als_g21465 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Als_g23932 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Als_g49635 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.02 OrthoFinder output from all 47 species
Aob_g33972 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Aop_g29764 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene13351.t1 Aspi01Gene13351 regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Azfi_s0124.g048464 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.05 OrthoFinder output from all 47 species
Cba_g15528 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Ceric.04G112400.1 Ceric.04G112400 regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.05 OrthoFinder output from all 47 species
Ceric.13G083400.1 Ceric.13G083400 regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.07 OrthoFinder output from all 47 species
Dac_g14035 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Dac_g23362 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.02 OrthoFinder output from all 47 species
Dac_g43865 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.06 OrthoFinder output from all 47 species
Dcu_g01980 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.06 OrthoFinder output from all 47 species
Dcu_g08275 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.04 OrthoFinder output from all 47 species
Dde_g09640 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.04 OrthoFinder output from all 47 species
Ehy_g17644 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.09 OrthoFinder output from all 47 species
Ehy_g20129 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Ehy_g20656 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.06 OrthoFinder output from all 47 species
Ehy_g29519 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
LOC_Os01g51010.1 LOC_Os01g51010 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g50210.1 LOC_Os03g50210 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os08g07830.1 LOC_Os08g07830 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g40975 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.05 OrthoFinder output from all 47 species
Len_g58366 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g59871 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
MA_10434372g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g09120.1 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Msp_g31103 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.08 OrthoFinder output from all 47 species
Msp_g48877 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.02 OrthoFinder output from all 47 species
Ore_g17521 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Pir_g08433 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Pir_g19693 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.02 OrthoFinder output from all 47 species
Pir_g57218 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Pnu_g09583 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Ppi_g09496 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Ppi_g31035 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Sam_g37977 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Solyc02g085830.4.1 Solyc02g085830 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g072560.3.1 Solyc04g072560 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc07g032230.3.1 Solyc07g032230 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g22531 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.05 OrthoFinder output from all 47 species
Spa_g25914 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g07646 No alias regulatory protein *(ISTL) of ESCRT-mediated sorTing &... 0.08 OrthoFinder output from all 47 species
Tin_g27462 No alias regulatory protein *(ISTL) of ESCRT-mediated sorTing &... 0.03 OrthoFinder output from all 47 species
Zm00001e005428_P001 Zm00001e005428 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005061 Ist1 12 176
No external refs found!