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  5. GSVIVT01015009001

GSVIVT01015009001


No description available


Gene families : OG0000821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015009001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00011660 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00170p00062530 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G29800 No alias RING/FYVE/PHD-type zinc finger family protein 0.03 OrthoFinder output from all 47 species
AT3G43230 No alias RING/FYVE/PHD-type zinc finger family protein 0.03 OrthoFinder output from all 47 species
Adi_g002025 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15210 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Aop_g07737 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Ceric.37G042800.1 Ceric.37G042800 auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Dde_g02242 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Ehy_g18591 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
LOC_Os06g35910.1 LOC_Os06g35910 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g17130.1 LOC_Os07g17130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g11370.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g11153 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05825 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Ore_g05728 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Sam_g06477 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Solyc02g071980.3.1 Solyc02g071980 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g04203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17958 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Spa_g31118 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.05 OrthoFinder output from all 47 species
Zm00001e014385_P001 Zm00001e014385 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e033254_P004 Zm00001e033254 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006672 ceramide metabolic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 161 226
IPR007461 Ysc84_actin-binding 343 468
No external refs found!