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  5. GSVIVT01013363001

GSVIVT01013363001


No description available


Gene families : OG0004892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013363001
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT1G42440 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
Aop_g09176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021357.35 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre16.g673700 No alias No description available 0.07 OrthoFinder output from all 47 species
Dcu_g08205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_29644 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g19250.1 LOC_Os11g19250 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_79106g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_834870g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g14950.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Ppi_g31248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo123319 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc04g082330.3.1 Solyc04g082330 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Tin_g08557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029566_P001 Zm00001e029566 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0042254 ribosome biogenesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR012948 AARP2CN 229 309
IPR007034 BMS1_TSR1_C 492 789
No external refs found!