GSVIVT01012865001


No description available


Gene families : OG0000329 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000329_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012865001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00172620 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00033p00173430 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00049p00216010 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G13227 No alias serine-rich protein-related 0.03 OrthoFinder output from all 47 species
AT5G11090 No alias serine-rich protein-related 0.07 OrthoFinder output from all 47 species
AT5G25280 No alias serine-rich protein-related 0.05 OrthoFinder output from all 47 species
Adi_g044951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057234 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g112767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37100 No alias component *(MED19) of head module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Aspi01Gene11466.t1 Aspi01Gene11466 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43626.t1 Aspi01Gene43626 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49291.t1 Aspi01Gene49291 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0168.g054641 No alias not classified & original description: CDS=1-495 0.04 OrthoFinder output from all 47 species
Ceric.25G031700.1 Ceric.25G031700 not classified & original description: pacid=50594457... 0.04 OrthoFinder output from all 47 species
Ceric.32G012100.1 Ceric.32G012100 not classified & original description: pacid=50598160... 0.04 OrthoFinder output from all 47 species
Dcu_g29877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g39321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014741001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_04477 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_29842 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_31432 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_36288 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g32469.1 LOC_Os02g32469 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g55610.1 LOC_Os02g55610 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g08815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35476 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10215954g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_5364765g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_75170g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_94560g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9485570g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g24638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09609 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008383 No alias not classified & original description: CDS=1-396 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015803 No alias not classified & original description: CDS=1-222 0.05 OrthoFinder output from all 47 species
Sam_g06205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g117290.1.1 Solyc03g117290 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Solyc12g009880.1.1 Solyc12g009880 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g00539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014685_P001 Zm00001e014685 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e016142_P001 Zm00001e016142 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e023673_P001 Zm00001e023673 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!