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No description available
Gene families : OG0000217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000217_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01012733001 | |
| Cluster | HCCA: Cluster_104 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00148p00028850 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AT3G45210 | No alias | Protein of unknown function, DUF584 | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g02883 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01038612001 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g43990.1 | LOC_Os04g43990 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g24337 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g28989 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_78373g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g05667 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo95729 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g032800.1.1 | Solyc02g032800 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g080510.1.1 | Solyc02g080510 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g11426 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007566_P001 | Zm00001e007566 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | HCCA |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | HCCA |
| CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007608 | Senescence_reg_S40 | 73 | 109 |
| No external refs found! |