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  5. GSVIVT01011794001

GSVIVT01011794001


Description : Vesicle trafficking.endomembrane trafficking.protein recycling.deubiquitination.BRO1 deubiquitinase recruiting protein


Gene families : OG0001827 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001827_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011794001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00214440 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.05 OrthoFinder output from all 47 species
AT1G15130 No alias Endosomal targeting BRO1-like domain-containing protein 0.07 OrthoFinder output from all 47 species
Adi_g057704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076949 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.05 OrthoFinder output from all 47 species
Adi_g076950 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.08 OrthoFinder output from all 47 species
Adi_g116681 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03347 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.03 OrthoFinder output from all 47 species
Ala_g02492 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.04 OrthoFinder output from all 47 species
Aob_g09598 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.04 OrthoFinder output from all 47 species
Aob_g18057 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0064.g035704 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0305.g063901 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.05 OrthoFinder output from all 47 species
Cba_g11586 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.1Z055000.1 Ceric.1Z055000 deubiquitinase recruiting protein *(BRO1) & original... 0.05 OrthoFinder output from all 47 species
Ceric.27G033300.1 Ceric.27G033300 deubiquitinase recruiting protein *(BRO1) & original... 0.04 OrthoFinder output from all 47 species
Cre01.g004350 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Dcu_g07127 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.07 OrthoFinder output from all 47 species
Gb_12639 No alias deubiquitinase recruiting protein (BRO1) 0.07 OrthoFinder output from all 47 species
Len_g02412 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.03 OrthoFinder output from all 47 species
Mp3g15580.1 No alias deubiquitinase recruiting protein (BRO1) 0.04 OrthoFinder output from all 47 species
Msp_g08811 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g01343 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g03810 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g17456 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.06 OrthoFinder output from all 47 species
Ore_g28194 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.07 OrthoFinder output from all 47 species
Ore_g44925 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018646 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.04 OrthoFinder output from all 47 species
Sam_g14255 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.02 OrthoFinder output from all 47 species
Smo102692 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 OrthoFinder output from all 47 species
Solyc04g007560.3.1 Solyc04g007560 deubiquitinase recruiting protein (BRO1) 0.06 OrthoFinder output from all 47 species
Solyc05g008430.4.1 Solyc05g008430 deubiquitinase recruiting protein (BRO1) 0.03 OrthoFinder output from all 47 species
Spa_g46190 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.03 OrthoFinder output from all 47 species
Spa_g50680 No alias deubiquitinase recruiting protein *(BRO1) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e004485_P001 Zm00001e004485 deubiquitinase recruiting protein (BRO1) 0.04 OrthoFinder output from all 47 species
Zm00001e012624_P003 Zm00001e012624 deubiquitinase recruiting protein (BRO1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:0110154 RNA decapping IEP HCCA
BP GO:0110156 methylguanosine-cap decapping IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025304 ALIX_V_dom 410 694
IPR004328 BRO1_dom 14 374
No external refs found!