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  5. GSVIVT01011766001

GSVIVT01011766001 (At17.1)


Aliases : At17.1

Description : Uncharacterized protein At1g66480 OS=Arabidopsis thaliana


Gene families : OG0001373 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001373_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011766001
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00035620 evm_27.TU.AmTr_v1... Uncharacterized protein At1g66480 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AMTR_s00077p00166320 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00113p00026730 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G64700 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.05 OrthoFinder output from all 47 species
AT1G66480 No alias plastid movement impaired 2 0.04 OrthoFinder output from all 47 species
AT1G71015 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Aev_g12299 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57399.t1 Aspi01Gene57399 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G010100.1 Ceric.37G010100 not classified & original description: pacid=50615888... 0.03 OrthoFinder output from all 47 species
Dcu_g09790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027432001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01030865001 No alias Uncharacterized protein At1g66480 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_33939 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g14780.1 LOC_Os06g14780 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Lfl_g20898 At17.1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436027g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10436027g0020 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_16509g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_20174g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_20252g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_208513g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_212588g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_248791g0010 At17.1 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
MA_2723686g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_356354g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_394398g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_6869016g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_91700g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_953514g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp3g17620.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g00614 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g39267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g008210.4.1 At17.1, Solyc05g008210 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc05g008220.4.1 At17.1, Solyc05g008220 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc10g005020.3.1 Solyc10g005020 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g27790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004161_P002 Zm00001e004161 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e015734_P001 Zm00001e015734 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e036745_P001 Zm00001e036745 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 1 160
No external refs found!