GSVIVT01011704001


Description : Vesicle trafficking.clathrin coated vesicle (CCV) machinery.CCV accessory factors.ECA1/2 adaptor protein


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011704001

Target Alias Description ECC score Gene Family Method Actions
AT4G32285 No alias ENTH/ANTH/VHS superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g087118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02242 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63284.t1 Aspi01Gene63284 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0276.g061428 No alias not classified & original description: CDS=1-2139 0.03 OrthoFinder output from all 47 species
Ceric.15G019200.1 Ceric.15G019200 accessory protein *(PlCALM3) & original description:... 0.05 OrthoFinder output from all 47 species
Cre09.g393136 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Ehy_g08479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_24032 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
Gb_34648 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
MA_10435921g0010 No alias Putative clathrin assembly protein At5g35200... 0.02 OrthoFinder output from all 47 species
MA_91475g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g09579 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11731 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Smo230819 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Solyc07g007820.3.1 Solyc07g007820 Putative clathrin assembly protein At5g35200... 0.03 OrthoFinder output from all 47 species
Zm00001e032313_P001 Zm00001e032313 ECA1/2 clathrin coated vesicle adaptor protein 0.05 OrthoFinder output from all 47 species
Zm00001e038481_P001 Zm00001e038481 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 31 309
No external refs found!