1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01011616001

GSVIVT01011616001 (CMPG1, ATCMPG1)


Aliases : CMPG1, ATCMPG1

Description : U-box domain-containing protein 20 OS=Arabidopsis thaliana


Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011616001
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00130440 CMPG2, ATCMPG2,... Protein degradation.peptide tagging.Ubiquitin... 0.07 OrthoFinder output from all 47 species
AMTR_s00030p00159240 PUB23,... E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00030p00161650 PUB23,... E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00069p00038840 PUB22,... E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00138p00053700 evm_27.TU.AmTr_v1... U-box domain-containing protein 21 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT3G02840 No alias ARM repeat superfamily protein 0.15 OrthoFinder output from all 47 species
AT3G11840 PUB24 plant U-box 24 0.05 OrthoFinder output from all 47 species
AT3G52450 PUB22 plant U-box 22 0.06 OrthoFinder output from all 47 species
AT5G37490 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G64660 CMPG2, ATCMPG2 CYS, MET, PRO, and GLY protein 2 0.09 OrthoFinder output from all 47 species
AT5G65920 No alias ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003285 PUB25 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g014414 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054744 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077173 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077174 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g107693 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02169 PUB23 U-Box-group-III E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g02974 PUB23 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g05258 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09134 PUB25 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16119 PUB25 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18167 PUB26 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g38062 PUB25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02187 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05204 PUB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06990 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20026 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10929 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12714 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23185 CMPG1, ATCMPG1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23643 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30969 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33086 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37093 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40105 PUB26 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g57047 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60936 PUB25 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g61569 PUB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62359 PUB26 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g12417 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g15330 PUB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g16033 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19134 PUB25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20185 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g04412 PUB23 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g04774 PUB25 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18761 PUB29, ATPUB29 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39282 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12032.t1 PUB25, Aspi01Gene12032 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15171.t1 PUB29, ATPUB29,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18444.t1 PUB23, Aspi01Gene18444 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18451.t1 PUB25, Aspi01Gene18451 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18467.t1 PUB23, Aspi01Gene18467 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene19337.t1 PUB26, Aspi01Gene19337 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19337.t2 PUB26, Aspi01Gene19337 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19342.t1 PUB26, Aspi01Gene19342 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19350.t1 PUB26, Aspi01Gene19350 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19351.t1 Aspi01Gene19351 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19355.t1 PUB26, Aspi01Gene19355 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25347.t1 PUB26, Aspi01Gene25347 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27391.t1 PUB26, Aspi01Gene27391 U-Box-group-III E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene33499.t1 PUB25, Aspi01Gene33499 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene44314.t1 PUB23, Aspi01Gene44314 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44315.t1 PUB23, Aspi01Gene44315 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44316.t1 PUB23, Aspi01Gene44316 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44317.t1 PUB23, Aspi01Gene44317 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44318.t1 PUB23, Aspi01Gene44318 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44321.t1 PUB23, Aspi01Gene44321 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44809.t1 PUB25, Aspi01Gene44809 U-Box-group-III E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene51615.t1 PUB15, Aspi01Gene51615 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene51624.t1 PUB15, Aspi01Gene51624 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55033.t1 PUB25, Aspi01Gene55033 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60604.t1 PUB26, Aspi01Gene60604 U-Box-group-III E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene67880.t1 PUB26, Aspi01Gene67880 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0096.g043747 PUB26 not classified & original description: CDS=1-1407 0.03 OrthoFinder output from all 47 species
Cba_g38190 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78214 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G004600.1 PUB26, Ceric.07G004600 E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G007700.1 PUB23, Ceric.10G007700 not classified & original description: pacid=50612519... 0.05 OrthoFinder output from all 47 species
Ceric.19G059800.1 PUB26, Ceric.19G059800 not classified & original description: pacid=50575490... 0.04 OrthoFinder output from all 47 species
Ceric.21G081600.1 PUB26, Ceric.21G081600 U-Box-group-III E3 ubiquitin ligase & original... 0.03 OrthoFinder output from all 47 species
Ceric.27G047700.1 PUB8, B80,... E3 ubiquitin ligase *(PUB8) & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g01592 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g07515 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08418 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10662 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01209 PUB23 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g01521 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g04516 PUB23 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g04683 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07421 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11691 PUB26 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g14166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26825 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46168 PUB23 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g01464 PUB26 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03660 PUB23 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g06700 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11880 CMPG1, ATCMPG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14303 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14998 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16036 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16356 PUB22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21913 PUB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_02627 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_02628 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.11 OrthoFinder output from all 47 species
Gb_02629 No alias U-box domain-containing protein 26 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_02635 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_11650 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_13090 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_16227 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_16228 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_17119 PUB22 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_19502 PUB23 U-box domain-containing protein 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_26429 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_27794 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_29851 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g64570.1 PUB23, LOC_Os01g64570 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os02g33680.1 CMPG2, ATCMPG2,... U-box domain-containing protein 29 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
LOC_Os02g34410.1 PUB25, LOC_Os02g34410 U-box domain-containing protein 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g50460.1 LOC_Os02g50460 U-box domain-containing protein 20 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os03g13010.1 LOC_Os03g13010 U-box domain-containing protein 75 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os03g13740.1 LOC_Os03g13740 U-box domain-containing protein 20 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os04g34140.1 PUB29, ATPUB29,... E3 ubiquitin ligase (PUB) 0.06 OrthoFinder output from all 47 species
LOC_Os04g58920.1 PUB23, LOC_Os04g58920 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g13870.1 LOC_Os06g13870 U-box domain-containing protein 21 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
LOC_Os10g03440.1 LOC_Os10g03440 U-box domain-containing protein 20 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os12g06410.1 PUB24, LOC_Os12g06410 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g01810 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16219 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g31416 PUB23 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g22781 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g24284 PUB25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430196g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10432179g0010 PUB22 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_10432813g0010 PUB22 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_10432981g0010 PUB22 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_1663g0020 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_17715g0010 CMPG1, ATCMPG1 U-box domain-containing protein 20 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_311559g0010 PUB22 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_33190g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_415344g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_58844g0020 PUB22 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_6335g0010 CMPG2, ATCMPG2 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
MA_684442g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_779502g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_83739g0020 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_84154g0010 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_8837995g0010 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_95662g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_95662g0020 PUB25 U-box domain-containing protein 27 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp2g06090.1 PUB25 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Mp3g01700.1 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g11730.1 PUB25 E3 ubiquitin ligase (PUB) 0.05 OrthoFinder output from all 47 species
Mp3g22740.1 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g22750.1 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp7g11000.1 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp7g11020.1 PUB25 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Msp_g11599 PUB23 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g12974 PUB25 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38744 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47390 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06628 PUB25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09373 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09512 PUB29, ATPUB29 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g37574 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08919 PUB25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08920 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g08921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10378 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15868 PUB23 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21834 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29206 PUB25 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g29544 PUB23 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g29886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33878 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35004 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36530 PUB23 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g42463 PUB23 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12470 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12799 PUB29, ATPUB29 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27394 PUB26 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g12004 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c24_16470V3.1 ATPUB17, PUB17,... RING/U-box superfamily protein with ARM repeat domain 0.03 OrthoFinder output from all 47 species
Ppi_g18199 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32476 PUB25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002717 PUB26 not classified & original description: CDS=1-1404 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020660 No alias not classified & original description: CDS=1-1503 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023196 PUB26 not classified & original description: CDS=1-1080 0.02 OrthoFinder output from all 47 species
Smo104879 PUB25 U-box domain-containing protein 25 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo172230 No alias U-box domain-containing protein 14 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo231257 PUB26 U-box domain-containing protein 26 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo403954 PUB25 U-box domain-containing protein 25 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g005160.4.1 Solyc01g005160 U-box domain-containing protein 21 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc01g007000.4.1 PUB22, Solyc01g007000 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.13 OrthoFinder output from all 47 species
Solyc01g007010.2.1 PUB22, Solyc01g007010 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.14 OrthoFinder output from all 47 species
Solyc01g007020.4.1 PUB23, Solyc01g007020 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.16 OrthoFinder output from all 47 species
Solyc01g007030.3.1 PUB22, Solyc01g007030 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
Solyc01g007040.4.1 PUB22, Solyc01g007040 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.15 OrthoFinder output from all 47 species
Solyc01g007050.3.1 PUB24, Solyc01g007050 E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc01g107980.3.1 PUB26, Solyc01g107980 U-box domain-containing protein 25 OS=Arabidopsis... 0.12 OrthoFinder output from all 47 species
Solyc04g008100.3.1 Solyc04g008100 U-box domain-containing protein 21 OS=Arabidopsis... 0.11 OrthoFinder output from all 47 species
Solyc04g071030.1.1 Solyc04g071030 E3 ubiquitin ligase (PUB) 0.13 OrthoFinder output from all 47 species
Solyc04g077610.4.1 Solyc04g077610 U-box domain-containing protein 30 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc06g074140.1.1 PUB24, Solyc06g074140 E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc11g006030.1.1 Solyc11g006030 U-box domain-containing protein 21 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc11g068920.1.1 PUB23, Solyc11g068920 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc11g068940.1.1 PUB24, Solyc11g068940 E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Spa_g00706 PUB23 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g03410 PUB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16409 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47017 PUB23 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57248 PUB29, ATPUB29 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06727 PUB26 U-Box-group-III E3 ubiquiTin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000999_P001 Zm00001e000999 U-box domain-containing protein 20 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e006484_P001 PUB23, Zm00001e006484 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e007109_P001 PUB23, Zm00001e007109 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e008064_P001 PUB26, Zm00001e008064 U-box domain-containing protein 27 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e014752_P001 PUB23, Zm00001e014752 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e014766_P001 CMPG2, ATCMPG2,... E3 ubiquitin ligase (PUB) 0.07 OrthoFinder output from all 47 species
Zm00001e014779_P001 PUB26, Zm00001e014779 U-box domain-containing protein 26 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e015763_P001 Zm00001e015763 U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e022679_P001 CMPG2, ATCMPG2,... U-box domain-containing protein 29 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e022698_P001 PUB26, Zm00001e022698 U-box domain-containing protein 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e036030_P001 Zm00001e036030 U-box domain-containing protein 21 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Zm00001e039417_P001 PUB23, Zm00001e039417 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e040854_P001 CMPG2, ATCMPG2,... U-box domain-containing protein 29 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 33 103
No external refs found!