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  5. GSVIVT01009845001

GSVIVT01009845001 (BPC6, BBR/BPC6, ATBPC6)


Aliases : BPC6, BBR/BPC6, ATBPC6

Description : RNA biosynthesis.transcriptional activation.BBR/BPC transcription factor


Gene families : OG0000626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009845001

Target Alias Description ECC score Gene Family Method Actions
Adi_g082066 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07241 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11648 ATBPC4, BPC4, BBR BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01547 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01685 BBR/BPC5, BPC5, ATBPC5 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0487.g073459 BPC3, ATBPC3 BBR/BPC-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G050900.1 ATBPC4, BPC4,... BBR/BPC-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G050800.1 BPC3, ATBPC3,... BBR/BPC-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01011589001 ATBPC1, BPC1, BBR RNA biosynthesis.transcriptional activation.BBR/BPC... 0.02 OrthoFinder output from all 47 species
GSVIVT01024162001 ATBPC4, BPC4, BBR RNA biosynthesis.transcriptional activation.BBR/BPC... 0.04 OrthoFinder output from all 47 species
LOC_Os06g04010.2 BPC6, BBR/BPC6,... transcription factor (BBR/BPC) 0.04 OrthoFinder output from all 47 species
LOC_Os10g02584.3 ATBPC2, BPC2,... transcription factor (BBR/BPC) 0.06 OrthoFinder output from all 47 species
Nbi_g01837 BBR/BPC5, BPC5, ATBPC5 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01263 BBR/BPC5, BPC5, ATBPC5 BBR/BPC-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03348 ATBPC4, BPC4, BBR BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09328 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11668 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0163.g024024 BPC3, ATBPC3 BBR/BPC-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g11843 No alias BBR/BPC-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g081170.3.1 BPC6, BBR/BPC6,... transcription factor (BBR/BPC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010409 GAGA-bd_tscrpt_act 4 146
No external refs found!