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Description : Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana
Gene families : OG0002734 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002734_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01008944001 | |
| Cluster | HCCA: Cluster_95 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00173p00060580 | evm_27.TU.AmTr_v1... | Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| AT1G77800 | No alias | PHD finger family protein | 0.17 | OrthoFinder output from all 47 species | |
| Adi_g019450 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g08413 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06882 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g14225 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g29424 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g69981 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene35511.t1 | Aspi01Gene35511 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene68157.t2 | Aspi01Gene68157 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009840 | No alias | not classified & original description: CDS=194-4429 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g15576 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.29G080500.1 | Ceric.29G080500 | not classified & original description: pacid=50624681... | 0.08 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021348.79 | ATX3, SDG14 | Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g39984 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g03210 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ehy_g15953 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_12353 | No alias | Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... | 0.12 | OrthoFinder output from all 47 species | |
| Gb_35107 | No alias | Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g52960.1 | LOC_Os02g52960 | Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os06g10690.1 | LOC_Os06g10690 | Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... | 0.11 | OrthoFinder output from all 47 species | |
| Len_g29830 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g19258 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_10435451g0030 | No alias | Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g14549 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g27295 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0138.g022590 | No alias | not classified & original description: CDS=632-4768 | 0.08 | OrthoFinder output from all 47 species | |
| Sam_g14038 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Smo407186 | No alias | Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g06993 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g22217 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g37190 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g13964 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015975_P004 | Zm00001e015975 | Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023803_P003 | Zm00001e023803 | Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030795_P001 | Zm00001e030795 | Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
| BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |