GSVIVT01008179001 (SPPA1, SPPA)

Aliases : SPPA1, SPPA

Description : Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease

Gene families : OG0003669 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003669_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01008179001

Target	Alias	Description	ECC score	Gene Family Method
Aev_g10536	SPPA1, SPPA	plastidial protease *(SppA) & original description: none	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000663.54	SPPA1, SPPA	Protein degradation.peptidase families.serine-type...	0.01	OrthoFinder output from all 47 species
Cre10.g444550	SPPA1, SPPA	Protein degradation.peptidase families.serine-type...	0.03	OrthoFinder output from all 47 species
Dac_g08824	SPPA1, SPPA	plastidial protease *(SppA) & original description: none	0.04	OrthoFinder output from all 47 species
Gb_05224	SPPA1, SPPA	plastidial protease (SppA)	0.03	OrthoFinder output from all 47 species
Len_g23586	SPPA1, SPPA	plastidial protease *(SppA) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e023452_P001	SPPA1, SPPA,...	plastidial protease (SppA)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002142	Peptidase_S49	193	344

External Links

No external refs found!