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  5. GSVIVT01007538001

GSVIVT01007538001


Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component


Gene families : OG0004513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004513_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007538001

Target Alias Description ECC score Gene Family Method Actions
AT4G24820 No alias 26S proteasome, regulatory subunit Rpn7;Proteasome... 0.05 OrthoFinder output from all 47 species
Ceric.15G063400.1 Ceric.15G063400 regulatory component *(RPN7) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.75 No alias Protein degradation.26S proteasome.regulatory... 0.04 OrthoFinder output from all 47 species
Cre13.g581450 No alias Protein degradation.26S proteasome.regulatory... 0.06 OrthoFinder output from all 47 species
Dde_g04762 No alias regulatory component *(RPN7) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Gb_07144 No alias regulatory component RPN7 of 26S proteasome 0.03 OrthoFinder output from all 47 species
LOC_Os04g40850.1 LOC_Os04g40850 regulatory component RPN7 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Lfl_g06054 No alias regulatory component *(RPN7) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Mp1g10100.1 No alias regulatory component RPN7 of 26S proteasome 0.06 OrthoFinder output from all 47 species
Zm00001e015028_P002 Zm00001e015028 regulatory component RPN7 of 26S proteasome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR000717 PCI_dom 254 354
IPR019585 Rpn7/CSN1 63 236
No external refs found!