GSVIVT01006302001


No description available


Gene families : OG0001248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01006302001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00191970 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00046p00193590 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g126576 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g08825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G076800.1 Ceric.18G076800 not classified & original description: pacid=50622194... 0.07 OrthoFinder output from all 47 species
GSVIVT01009215001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_00786 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_00787 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g44040.1 LOC_Os08g44040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g03790.1 LOC_Os12g03790 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g45652 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_87408g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g20109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo413798 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc04g076640.3.1 Solyc04g076640 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc04g076650.2.1 Solyc04g076650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g011290.3.1 Solyc11g011290 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g011300.2.1 Solyc11g011300 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc11g011320.1.1 Solyc11g011320 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g04774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013992_P006 Zm00001e013992 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR010325 Rhamnogal_lyase 3 184
IPR010325 Rhamnogal_lyase 272 320
IPR029411 RG-lyase_III 560 747
IPR029413 RG-lyase_II 475 546
No external refs found!