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  5. GSVIVT01001828001

GSVIVT01001828001


No description available


Gene families : OG0006458 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006458_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001828001
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00107230 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AT5G14260 No alias Rubisco methyltransferase family protein 0.03 OrthoFinder output from all 47 species
Adi_g105315 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.04 OrthoFinder output from all 47 species
Aev_g03895 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.03 OrthoFinder output from all 47 species
Ala_g08077 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.04 OrthoFinder output from all 47 species
Als_g10491 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.03 OrthoFinder output from all 47 species
Aob_g03323 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene38604.t1 Aspi01Gene38604 protein lysine N-methyltransferase *(SAFE1) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0271.g061209 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.04 OrthoFinder output from all 47 species
Cba_g19263 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.26G038400.1 Ceric.26G038400 protein lysine N-methyltransferase *(SAFE1) & original... 0.03 OrthoFinder output from all 47 species
Dde_g30677 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g07683 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.04 OrthoFinder output from all 47 species
LOC_Os12g13460.1 LOC_Os12g13460 [Fructose-bisphosphate aldolase]-lysine... 0.07 OrthoFinder output from all 47 species
Msp_g01165 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g08544 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.05 OrthoFinder output from all 47 species
Pir_g10833 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g12195 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006185 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.04 OrthoFinder output from all 47 species
Smo110000 No alias Ribulose-1,5 bisphosphate carboxylase/oxygenase large... 0.04 OrthoFinder output from all 47 species
Solyc02g068050.4.1 Solyc02g068050 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Tin_g06623 No alias protein lysine N-methyltransferase *(SAFE1) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e020362_P005 Zm00001e020362 [Fructose-bisphosphate aldolase]-lysine... 0.1 OrthoFinder output from all 47 species
Zm00001e027953_P005 Zm00001e027953 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR015353 Rubisco_LSMT_subst-bd 276 397
No external refs found!