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  5. GSVIVT01001074001

GSVIVT01001074001


Description : Class V chitinase OS=Arabidopsis thaliana


Gene families : OG0000696 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000696_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001074001
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT4G19720 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.05 OrthoFinder output from all 47 species
AT4G19740 No alias Glycosyl hydrolase superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G19750 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.03 OrthoFinder output from all 47 species
AT4G19760 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.03 OrthoFinder output from all 47 species
Adi_g077591 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g11597 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20488 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64398.t1 Aspi01Gene64398 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06816 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17721 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47090 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16746 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28813 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001059001 No alias Class V chitinase OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01001068001 No alias Class V chitinase OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_00910 No alias Class V chitinase OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_04927 No alias Class V chitinase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_04928 No alias Class V chitinase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_04931 No alias no description available(sp|a0a072ur65|cht5b_medtr :... 0.05 OrthoFinder output from all 47 species
Gb_10730 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g27400.1 LOC_Os11g27400 no description available(sp|u5n4e3|nfh1_medtr : 191.0) &... 0.03 OrthoFinder output from all 47 species
Len_g28798 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g50672 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g62031 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65217 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00782 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g005100.4.1 Solyc07g005100 Class V chitinase OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Tin_g37607 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 77 317
No external refs found!