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  5. GSVIVT01000655001

GSVIVT01000655001


Description : Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana


Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000655001

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000634001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.06 OrthoFinder output from all 47 species
GSVIVT01000666001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.04 OrthoFinder output from all 47 species
GSVIVT01000871001 No alias Putative disease resistance RPP13-like protein 1... 0.07 OrthoFinder output from all 47 species
GSVIVT01001399001 RLK1 G-type lectin S-receptor-like serine/threonine-protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01001453001 No alias Putative disease resistance RPP13-like protein 1... 0.05 OrthoFinder output from all 47 species
GSVIVT01005316001 No alias Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species
GSVIVT01006243001 No alias Putative disease resistance protein At3g14460... 0.04 OrthoFinder output from all 47 species
GSVIVT01012443001 No alias Putative disease resistance RPP13-like protein 1... 0.05 OrthoFinder output from all 47 species
GSVIVT01022861001 No alias No description available 0.12 OrthoFinder output from all 47 species
GSVIVT01022965001 No alias Putative disease resistance RPP13-like protein 1... 0.11 OrthoFinder output from all 47 species
GSVIVT01023310001 No alias No description available 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 97 200
No external refs found!