GSVIVT01000391001 (GAD, GAD1)

Aliases : GAD, GAD1

Description : Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.gamma-aminobutyrate (GABA).glutamate decarboxylase

Gene families : OG0000690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000690_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01000391001
Cluster	HCCA: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method
AT1G65960	GAD2	glutamate decarboxylase 2	0.05	OrthoFinder output from all 47 species
Adi_g040720	GAD2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g38116	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene12693.t1	GAD, GAD1,...	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene37978.t1	GAD, GAD1,...	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.17G022200.1	GAD, GAD1,...	glutamate decarboxylase *(GAD) & original description:...	0.03	OrthoFinder output from all 47 species
Dde_g11785	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01011565001	GAD, GAD1	Amino acid metabolism.biosynthesis.glutamate...	0.03	OrthoFinder output from all 47 species
Gb_38319	GAD, GAD1	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species
Gb_38320	GAD, GAD1	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species
LOC_Os03g13300.1	GAD, GAD1, LOC_Os03g13300	glutamate decarboxylase	0.03	OrthoFinder output from all 47 species
LOC_Os03g51080.1	GAD, GAD1, LOC_Os03g51080	glutamate decarboxylase	0.03	OrthoFinder output from all 47 species
Len_g08076	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.04	OrthoFinder output from all 47 species
Len_g20416	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g07461	GAD2	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Nbi_g09194	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g61216	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g55008	GAD2	glutamate decarboxylase *(GAD) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e007985_P001	GAD4, Zm00001e007985	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	IEA	Interproscan
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002129	PyrdxlP-dep_de-COase	33	381

External Links

No external refs found!

GSVIVT01000391001 (GAD, GAD1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation