GSVIVT01000268001


No description available


Gene families : OG0003305 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003305_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000268001

Target Alias Description ECC score Gene Family Method Actions
Aob_g21891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35288 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc02g063050.3.1 Solyc02g063050 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g039430.3.1 Solyc10g039430 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e012574_P001 Zm00001e012574 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e017135_P004 Zm00001e017135 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e029723_P004 Zm00001e029723 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e037779_P002 Zm00001e037779 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003689 DNA clamp loader activity IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!