Solyc12g098910.2.1 (CIPK1, SnRK3.16,...)

Aliases : CIPK1, SnRK3.16, Solyc12g098910

Description : SNF1-related protein kinase (SnRK3)

Gene families : OG0000065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g098910.2.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00046p00229830	ATCIPK8, CIPK8,...	External stimuli response.salinity.SOS (Salt Overly...	0.02	OrthoFinder output from all 47 species
AMTR_s00065p00195610	SnRK3.25, CIPK25	Protein modification.phosphorylation.CAMK kinase...	0.03	OrthoFinder output from all 47 species
AMTR_s00130p00110630	PKS18, CIPK20,...	Protein modification.phosphorylation.CAMK kinase...	0.02	OrthoFinder output from all 47 species
AT1G30270	SnRK3.23,...	CBL-interacting protein kinase 23	0.06	OrthoFinder output from all 47 species
AT2G38490	SnRK3.19, CIPK22	CBL-interacting protein kinase 22	0.05	OrthoFinder output from all 47 species
AT3G23000	ATSRPK1,...	CBL-interacting protein kinase 7	0.05	OrthoFinder output from all 47 species
AT4G24400	ATCIPK8, CIPK8,...	CBL-interacting protein kinase 8	0.05	OrthoFinder output from all 47 species
AT5G58380	PKS2, CIPK10,...	SOS3-interacting protein 1	0.07	OrthoFinder output from all 47 species
Adi_g009461	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.08	OrthoFinder output from all 47 species
Adi_g013144	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Adi_g054937	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Adi_g056775	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Adi_g079516	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Adi_g109239	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Ala_g01962	SNRK3.11, SOS2,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ala_g06821	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ala_g07338	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ala_g10328	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ala_g12084	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ala_g25821	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Als_g19210	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.06	OrthoFinder output from all 47 species
Als_g38122	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Als_g48801	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aob_g04439	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aob_g20875	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aop_g09796	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.07	OrthoFinder output from all 47 species
Aop_g13824	SNRK3.11, SOS2,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aop_g18546	ATCIPK8, CIPK8,...	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Aop_g61231	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aspi01Gene03541.t1	KIN10, SNRK1.1,...	EC_2.7 transferase transferring phosphorus-containing...	0.06	OrthoFinder output from all 47 species
Aspi01Gene05936.t1	CIPK3, SnRK3.17,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aspi01Gene18098.t1	SnRK3.12, PKS6,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aspi01Gene42277.t1	SnRK3.12, PKS6,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aspi01Gene44902.t1	SnRK3.12, PKS6,...	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Cba_g23796	KIN10, SNRK1.1, AKIN10	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Cba_g24281	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Cba_g57988	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ceric.05G081700.1	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ceric.08G059600.1	SnRK3.12, PKS6,...	EC_2.7 transferase transferring phosphorus-containing...	0.06	OrthoFinder output from all 47 species
Ceric.16G005500.1	CIPK3, SnRK3.17,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ceric.25G059800.1	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ceric.30G066300.1	CIPK3, SnRK3.17,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ceric.33G018700.1	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Dac_g09883	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dac_g12087	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dac_g13626	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Dac_g28647	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dac_g46059	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Dcu_g41142	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dde_g03849	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ehy_g04784	SNRK3.11, SOS2,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ehy_g07581	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ehy_g07587	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ehy_g07631	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ehy_g14280	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ehy_g19472	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
GSVIVT01017690001	CIPK1, SnRK3.16	Protein modification.phosphorylation.CAMK kinase...	0.04	OrthoFinder output from all 47 species
Gb_28009	WL4, SnRK3.9,...	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
Gb_28012	WL4, SnRK3.9,...	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
LOC_Os01g10870.1	WL4, SnRK3.9,...	SNF1-related protein kinase (SnRK3)	0.04	OrthoFinder output from all 47 species
LOC_Os09g25100.1	CIPK6, SIP3,...	SNF1-related protein kinase (SnRK3)	0.02	OrthoFinder output from all 47 species
Len_g02797	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Len_g40809	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.06	OrthoFinder output from all 47 species
Len_g48853	KIN10, SNRK1.1, AKIN10	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Len_g56031	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Lfl_g27538	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
MA_134411g0010	SnRK3.12, PKS6, CIPK9	SNF1-related protein kinase (SnRK3)	0.04	OrthoFinder output from all 47 species
MA_309699g0010	PKS18, CIPK20, SnRK3.6	CBL-interacting protein kinase 5 OS=Oryza sativa subsp....	0.06	OrthoFinder output from all 47 species
MA_31203g0010	SnRK3.23,...	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
MA_819000g0010	No alias	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
Msp_g12513	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Nbi_g11113	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Nbi_g15819	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Nbi_g17972	CIPK3, SnRK3.17	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Nbi_g18922	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Pir_g40550	KIN10, SNRK1.1, AKIN10	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Pir_g52994	KIN10, SNRK1.1, AKIN10	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ppi_g03873	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ppi_g05048	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Ppi_g12777	SnRK3.23,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0154.g023555	SnRK3.12, PKS6, CIPK9	not classified & original description: CDS=702-908	0.02	OrthoFinder output from all 47 species
Sam_g10643	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Sam_g29620	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Smo22400	KIN10, SNRK1.1, AKIN10	Multi-process regulation.SnRK1 metabolic regulator...	0.06	OrthoFinder output from all 47 species
Smo90416	No alias	Protein modification.phosphorylation.CAMK kinase...	0.03	OrthoFinder output from all 47 species
Solyc06g050300.3.1	PKS2, CIPK10,...	SNF1-related protein kinase (SnRK3)	0.05	OrthoFinder output from all 47 species
Solyc09g042660.4.1	PKS2, CIPK10,...	SNF1-related protein kinase (SnRK3)	0.05	OrthoFinder output from all 47 species
Solyc09g083090.4.1	ATSRPK1,...	CBL-interacting serine/threonine-protein kinase 7...	0.05	OrthoFinder output from all 47 species
Spa_g17286	KIN10, SNRK1.1, AKIN10	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Spa_g21404	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Spa_g26629	SnRK3.23,...	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Spa_g31336	SnRK3.12, PKS6, CIPK9	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Zm00001e004090_P001	CIPK6, SIP3,...	SNF1-related protein kinase (SnRK3)	0.04	OrthoFinder output from all 47 species
Zm00001e009819_P001	SnRK3.25,...	SNF1-related protein kinase (SnRK3)	0.05	OrthoFinder output from all 47 species
Zm00001e010633_P001	CIPK3, SnRK3.17,...	CBL-interacting protein kinase 3 OS=Oryza sativa subsp....	0.03	OrthoFinder output from all 47 species
Zm00001e023967_P001	CIPK2, SnRK3.2,...	SNF1-related protein kinase (SnRK3)	0.06	OrthoFinder output from all 47 species
Zm00001e027413_P002	WL4, SnRK3.9,...	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species
Zm00001e034151_P001	SnRK3.25,...	SNF1-related protein kinase (SnRK3)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004559	alpha-mannosidase activity	IEP	HCCA
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0015923	mannosidase activity	IEP	HCCA
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	30	285
IPR001772	KA1_dom	419	446
IPR004041	NAF_dom	332	387

External Links

No external refs found!

Solyc12g098910.2.1 (CIPK1, SnRK3.16,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation