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  5. Solyc12g098200.2.1

Solyc12g098200.2.1 (AtPP2-B10, PP2-B10,...)


Aliases : AtPP2-B10, PP2-B10, Solyc12g098200

Description : F-box protein PP2-B10 OS=Arabidopsis thaliana (sp|q9zvq6|p2b10_arath : 204.0)


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g098200.2.1

Target Alias Description ECC score Gene Family Method Actions
AT1G09155 PP2-B15, AtPP2-B15 phloem protein 2-B15 0.05 OrthoFinder output from all 47 species
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.05 OrthoFinder output from all 47 species
Aev_g08542 PP2-A15, AtPP2-A15 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32123 AtPP2-B2, PP2-B2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58763 PP2-A15, AtPP2-A15 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55185.t1 MEE66, Aspi01Gene55185 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55186.t1 AtPP2-B8,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55189.t2 ATPP2-A4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0322.g064522 No alias not classified & original description: CDS=100-843 0.03 OrthoFinder output from all 47 species
Azfi_s2399.g111181 No alias not classified & original description: CDS=192-1106 0.02 OrthoFinder output from all 47 species
Ceric.16G068300.1 Ceric.16G068300 not classified & original description: pacid=50589756... 0.02 OrthoFinder output from all 47 species
Dac_g08840 AtPP2-B8, PP2-B8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019854001 PP2-A11, AtPP2-A11 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Lfl_g25665 MEE66 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10434357g0020 PP2-B15, AtPP2-B15 F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_203210g0010 PP2-B15, AtPP2-B15 F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_413510g0010 PP2-B15, AtPP2-B15 F-box protein PP2-B11 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_5038g0010 ATPP2-B11, PP2-B11 F-box protein PP2-B11 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp4g13890.1 No alias Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g10204 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23616 ATPP2-A4, PP2-A4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g29123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g25195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g069040.4.1 Solyc02g069040 Lectin OS=Luffa acutangula (sp|c0hjv2|lec_lufac : 91.7) 0.03 OrthoFinder output from all 47 species
Solyc04g056680.2.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc08g080360.3.1 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Tin_g41948 PP2-B4, AtPP2-B4 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR025886 PP2-like 97 265
IPR001810 F-box_dom 4 47
No external refs found!