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  5. Solyc12g098090.1.1

Solyc12g098090.1.1 (CHS, TT4, ATCHS,...)


Aliases : CHS, TT4, ATCHS, Solyc12g098090

Description : chalcone synthase


Gene families : OG0000113 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g098090.1.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00092780 CHS, TT4, ATCHS,... Secondary metabolism.phenolics.flavonoid synthesis and... 0.03 OrthoFinder output from all 47 species
AMTR_s00111p00033190 LAP6,... Cell wall.sporopollenin.synthesis.hydroxyalkyl... 0.04 OrthoFinder output from all 47 species
AMTR_s00182p00053650 LAP5,... Cell wall.sporopollenin.synthesis.hydroxyalkyl... 0.04 OrthoFinder output from all 47 species
AT1G02050 LAP6 Chalcone and stilbene synthase family protein 0.03 OrthoFinder output from all 47 species
Adi_g022305 LAP6 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103189 LAP6 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21870 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g38635 LAP6 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39683 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g42366 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29260 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67262 LAP6 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38759 LAP6 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42849 LAP6 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46942 LAP6 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010565001 CHS, TT4, ATCHS Secondary metabolism.phenolics.flavonoid synthesis and... 0.03 OrthoFinder output from all 47 species
GSVIVT01018219001 LAP6 Cell wall.sporopollenin.synthesis.hydroxyalkyl... 0.05 OrthoFinder output from all 47 species
GSVIVT01024107001 LAP5 Type III polyketide synthase B OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os07g22850.1 LAP5, LOC_Os07g22850 hydroxyalkyl alpha-pyrone synthase 0.02 OrthoFinder output from all 47 species
LOC_Os10g34360.1 LAP6, LOC_Os10g34360 hydroxyalkyl alpha-pyrone synthase 0.03 OrthoFinder output from all 47 species
LOC_Os11g35930.1 CHS, TT4, ATCHS,... Enzyme classification.EC_2 transferases.EC_2.3... 0.02 OrthoFinder output from all 47 species
Len_g59019 LAP6 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
MA_4931944g0010 LAP6 Type III polyketide synthase A OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_619670g0010 LAP5 Type III polyketide synthase B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Ore_g31823 LAP6 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41565 LAP5 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08098 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18438 LAP6 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s2936.g028503 CHS, TT4, ATCHS EC_2.3 acyltransferase & original description: CDS=1-1116 0.03 OrthoFinder output from all 47 species
Solyc05g053170.3.1 CHS, TT4, ATCHS,... chalcone synthase 0.03 OrthoFinder output from all 47 species
Zm00001e004538_P001 LAP6, Zm00001e004538 hydroxyalkyl alpha-pyrone synthase 0.02 OrthoFinder output from all 47 species
Zm00001e012647_P001 LAP6, Zm00001e012647 hydroxyalkyl alpha-pyrone synthase 0.02 OrthoFinder output from all 47 species
Zm00001e024402_P001 CHS, TT4, ATCHS,... Enzyme classification.EC_2 transferases.EC_2.3... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001099 Chalcone/stilbene_synt_N 19 243
IPR012328 Chalcone/stilbene_synt_C 253 402
No external refs found!