Aliases : EIF4A-2, Solyc12g096000
Description : mRNA unwinding factor (eIF4A)
Gene families : OG0000532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000532_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc12g096000.2.1 | |
Cluster | HCCA: Cluster_96 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00036p00181640 | EIF4A-2,... | Protein biosynthesis.translation initiation.mRNA... | 0.03 | OrthoFinder output from all 47 species | |
AT1G54270 | EIF4A-2 | eif4a-2 | 0.04 | OrthoFinder output from all 47 species | |
AT1G72730 | No alias | DEA(D/H)-box RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G13920 | TIF4A1, EIF4A1, RH4 | eukaryotic translation initiation factor 4A1 | 0.07 | OrthoFinder output from all 47 species | |
AT3G19760 | EIF4A-III | eukaryotic initiation factor 4A-III | 0.08 | OrthoFinder output from all 47 species | |
Aev_g07810 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g10607 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g13754 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g14573 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0010.g012425 | No alias | not classified & original description: CDS=200-1144 | 0.02 | OrthoFinder output from all 47 species | |
Cba_g20199 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g42587 | EIF4A-III | helicase component *(eIF4A3) of RNA quality control Exon... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g03759 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g29865 | EIF4A-III | helicase component *(eIF4A3) of RNA quality control Exon... | 0.02 | OrthoFinder output from all 47 species | |
Dde_g43100 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01015173001 | EIF4A-2 | Protein biosynthesis.translation initiation.mRNA... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g48750.2 | EIF4A-2, LOC_Os06g48750 | mRNA unwinding factor (eIF4A) | 0.03 | OrthoFinder output from all 47 species | |
Len_g57124 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Mp4g09540.1 | EIF4A-III | helicase component eIF4A3 of RNA quality control Exon... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g01109 | EIF4A-III | helicase component *(eIF4A3) of RNA quality control Exon... | 0.04 | OrthoFinder output from all 47 species | |
Msp_g12910 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g15136 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g10223 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g10144 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g26423 | EIF4A-III | helicase component *(eIF4A3) of RNA quality control Exon... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g35004 | No alias | mRNA unwinding factor *(eIF4A)) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g05950 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g20030 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g24980 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g05567 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013648_P002 | EIF4A-2, Zm00001e013648 | mRNA unwinding factor (eIF4A) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030233_P004 | EIF4A-2, Zm00001e030233 | mRNA unwinding factor (eIF4A) | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0008612 | peptidyl-lysine modification to peptidyl-hypusine | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0051604 | protein maturation | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
No external refs found! |