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  5. Solyc12g044290.2.1

Solyc12g044290.2.1 (Solyc12g044290)


Aliases : Solyc12g044290

Description : Malonate--CoA ligase OS=Arabidopsis thaliana (sp|q8h151|aae13_arath : 206.0)


Gene families : OG0002773 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002773_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g044290.2.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT3G16170 No alias AMP-dependent synthetase and ligase family protein 0.08 OrthoFinder output from all 47 species
Adi_g077149 No alias malonyl-CoA synthetase *(mtMCS)) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g04719 No alias malonyl-CoA synthetase *(mtMCS)) & original description: none 0.02 OrthoFinder output from all 47 species
MA_9661283g0010 No alias Malonate--CoA ligase OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp1g07850.1 No alias malonyl-CoA synthetase (mtMCS) 0.03 OrthoFinder output from all 47 species
Spa_g12539 No alias malonyl-CoA synthetase *(mtMCS)) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e019743_P005 Zm00001e019743 malonyl-CoA synthetase (mtMCS) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 68 277
No external refs found!