1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g033060.1.1

Solyc12g033060.1.1 (PSAB, Solyc12g033060)


Aliases : PSAB, Solyc12g033060

Description : Photosystem I P700 chlorophyll a apoprotein A2 OS=Solanum lycopersicum (sp|q2mia1|psab_sollc : 472.0)


Gene families : OG0001111 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g033060.1.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Solyc09g015290.1.1 PSAA, Solyc09g015290 Photosystem I P700 chlorophyll a apoprotein A1 OS=Coffea... 0.02 OrthoFinder output from all 47 species
Solyc12g035740.1.1 PSAB, Solyc12g035740 Photosystem I P700 chlorophyll a apoprotein A2 OS=Atropa... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009579 thylakoid IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 179 272
IPR001280 PSI_PsaA/B 1 179
No external refs found!