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Aliases : LUT2, Solyc12g008980
Description : lycopene epsilon cyclase (LCY-e)
Gene families : OG0006884 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006884_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00052p00167110 | LUT2,... | Secondary metabolism.terpenoids.terpenoid... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g23623 | LUT2 | lycopene epsilon cyclase *(LCY-e) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g09021 | LUT2 | lycopene epsilon cyclase *(LCY-e) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene14206.t1 | LUT2, Aspi01Gene14206 | lycopene epsilon cyclase *(LCY-e) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene40509.t1 | LUT2, Aspi01Gene40509 | lycopene epsilon cyclase *(LCY-e) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g01169 | LUT2 | lycopene epsilon cyclase *(LCY-e) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.11G087300.1 | LUT2, Ceric.11G087300 | lycopene epsilon cyclase *(LCY-e) & original... | 0.11 | OrthoFinder output from all 47 species | |
| Cre06.g267600 | LUT2 | Secondary metabolism.terpenoids.terpenoid... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g24635 | LUT2 | lycopene epsilon cyclase *(LCY-e) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02852 | LUT2 | lycopene epsilon cyclase *(LCY-e) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g17548 | LUT2 | lycopene epsilon cyclase *(LCY-e) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015169001 | LUT2 | Secondary metabolism.terpenoids.terpenoid... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g39960.1 | LUT2, LOC_Os01g39960 | lycopene epsilon cyclase (LCY-e) | 0.11 | OrthoFinder output from all 47 species | |
| Len_g01326 | LUT2 | lycopene epsilon cyclase *(LCY-e) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g09120 | LUT2 | lycopene epsilon cyclase *(LCY-e) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_10437269g0010 | LUT2 | lycopene epsilon cyclase (LCY-e) | 0.1 | OrthoFinder output from all 47 species | |
| Mp7g05820.1 | LUT2 | lycopene epsilon cyclase (LCY-e) | 0.08 | OrthoFinder output from all 47 species | |
| Nbi_g08673 | LUT2 | lycopene epsilon cyclase *(LCY-e) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g03904 | LUT2 | lycopene epsilon cyclase *(LCY-e) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g19829 | LUT2 | lycopene epsilon cyclase *(LCY-e) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Pnu_g18174 | LUT2 | lycopene epsilon cyclase *(LCY-e) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g13457 | No alias | lycopene epsilon cyclase *(LCY-e) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo101391 | LUT2 | Secondary metabolism.terpenoids.terpenoid... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g22549 | LUT2 | lycopene epsilon cyclase *(LCY-e) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027776_P002 | LUT2, Zm00001e027776 | lycopene epsilon cyclase (LCY-e) | 0.1 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0017038 | protein import | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |