1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g008960.2.1

Solyc12g008960.2.1 (Solyc12g008960)


Aliases : Solyc12g008960

Description : IQ domain-containing protein IQM1 OS=Arabidopsis thaliana (sp|o82645|iqm1_arath : 537.0)


Gene families : OG0002150 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002150_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g008960.2.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00135420 evm_27.TU.AmTr_v1... IQ domain-containing protein IQM4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G26190 No alias calmodulin-binding family protein 0.03 OrthoFinder output from all 47 species
AT3G13600 No alias calmodulin-binding family protein 0.02 OrthoFinder output from all 47 species
AT3G58480 No alias calmodulin-binding family protein 0.04 OrthoFinder output from all 47 species
AT4G33050 EDA39 calmodulin-binding family protein 0.11 OrthoFinder output from all 47 species
AT5G57010 No alias calmodulin-binding family protein 0.05 OrthoFinder output from all 47 species
Ala_g08162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08936 EDA39 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015178001 No alias IQ domain-containing protein IQM4 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01017097001 No alias IQ domain-containing protein IQM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01025434001 No alias IQ domain-containing protein IQM2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01035381001 EDA39 IQ domain-containing protein IQM1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_10224 No alias IQ domain-containing protein IQM2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os01g38980.1 EDA39, LOC_Os01g38980 IQ domain-containing protein IQM4 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
LOC_Os03g25760.1 LOC_Os03g25760 IQ domain-containing protein IQM2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os05g10840.2 LOC_Os05g10840 IQ domain-containing protein IQM4 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
LOC_Os07g43970.1 LOC_Os07g43970 IQ domain-containing protein IQM2 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
LOC_Os12g05420.1 LOC_Os12g05420 IQ domain-containing protein IQM3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g01929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_50509g0010 No alias IQ domain-containing protein IQM6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_63468g0010 No alias IQ domain-containing protein IQM2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Pir_g35617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g085610.2.1 Solyc10g085610 IQ domain-containing protein IQM3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g05887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020488_P001 Zm00001e020488 IQ domain-containing protein IQM4 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Zm00001e027797_P001 Zm00001e027797 IQ domain-containing protein IQM4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e031286_P002 Zm00001e031286 IQ domain-containing protein IQM5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e038131_P002 Zm00001e038131 IQ domain-containing protein IQM2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e042223_P001 Zm00001e042223 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!