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  5. Solyc11g072710.3.1

Solyc11g072710.3.1 (RPT1, PHOT1, NPH1,...)


Aliases : RPT1, PHOT1, NPH1, JK224, Solyc11g072710

Description : phototropin light receptor. phototropin photoreceptor


Gene families : OG0001978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g072710.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00186390 RPT1, PHOT1,... External stimuli response.light.UV-A/blue... 0.02 OrthoFinder output from all 47 species
Dcu_g16400 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ehy_g09231 NPL1, PHOT2 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
GSVIVT01025082001 RPT1, PHOT1, NPH1, JK224 External stimuli response.light.UV-A/blue... 0.05 OrthoFinder output from all 47 species
MA_177704g0010 NPL1, PHOT2 Phototropin-2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp5g03810.1 NPL1, PHOT2 protein kinase (AGC-VIII). phototropin light receptor.... 0.02 OrthoFinder output from all 47 species
Ppi_g32597 RPT1, PHOT1, NPH1, JK224 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Sam_g50260 No alias EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR000014 PAS 507 572
IPR000014 PAS 210 306
No external refs found!