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  5. Solyc11g071760.3.1

Solyc11g071760.3.1 (CML39, CML37, Solyc11g071760)


Aliases : CML39, CML37, Solyc11g071760

Description : Calcium-binding protein CML38 OS=Arabidopsis thaliana (sp|q9sre6|cml38_arath : 129.0)


Gene families : OG0008741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008741_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g071760.3.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00067280 CML38,... Putative calcium-binding protein CML19 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
AT1G76650 CML38 calmodulin-like 38 0.1 OrthoFinder output from all 47 species
AT3G01830 No alias Calcium-binding EF-hand family protein 0.07 OrthoFinder output from all 47 species
AT5G42380 CML39, CML37 calmodulin like 37 0.07 OrthoFinder output from all 47 species
GSVIVT01010378001 APC1, PC1 Probable calcium-binding protein CML31 OS=Oryza sativa... 0.1 OrthoFinder output from all 47 species
GSVIVT01010379001 CML38 Probable calcium-binding protein CML31 OS=Oryza sativa... 0.09 OrthoFinder output from all 47 species
GSVIVT01010380001 No alias Probable calcium-binding protein CML31 OS=Oryza sativa... 0.09 OrthoFinder output from all 47 species
GSVIVT01010383001 APC1, PC1 Putative calcium-binding protein CML23 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
GSVIVT01010385001 CML41 Putative calcium-binding protein CML19 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
LOC_Os01g72530.1 LOC_Os01g72530 Probable calcium-binding protein CML31 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
LOC_Os11g01390.1 LOC_Os11g01390 Probable calcium-binding protein CML25/26 OS=Oryza... 0.03 OrthoFinder output from all 47 species
LOC_Os12g01400.1 LOC_Os12g01400 Probable calcium-binding protein CML25/26 OS=Oryza... 0.04 OrthoFinder output from all 47 species
Pir_g26983 CML38 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g005040.1.1 CML39, CML37,... Probable calcium-binding protein CML31 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Zm00001e028302_P001 Zm00001e028302 Putative calcium-binding protein CML19 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 65 125
No external refs found!