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  5. Solyc11g017250.2.1

Solyc11g017250.2.1 (EMB3003, Solyc11g017250)


Aliases : EMB3003, Solyc11g017250

Description : dihydrolipoamide acetyltransferase component E2 of plastidial pyruvate dehydrogenase complex


Gene families : OG0003205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g017250.2.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00107590 LTA2, PLE2,... Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.05 OrthoFinder output from all 47 species
AMTR_s00180p00054930 EMB3003,... Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.08 OrthoFinder output from all 47 species
AT1G34430 EMB3003 2-oxoacid dehydrogenases acyltransferase family protein 0.11 OrthoFinder output from all 47 species
AT3G25860 LTA2, PLE2 2-oxoacid dehydrogenases acyltransferase family protein 0.11 OrthoFinder output from all 47 species
Als_g03762 EMB3003 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05120 LTA2, PLE2 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06650 EMB3003 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11385 LTA2, PLE2 EC_2.3 acyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g36621 EMB3003 EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G023000.1 EMB3003, Ceric.12G023000 EC_2.3 acyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.36G026000.1 LTA2, PLE2,... EC_2.3 acyltransferase & original description:... 0.12 OrthoFinder output from all 47 species
Cre03.g158900 EMB3003 Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.06 OrthoFinder output from all 47 species
GSVIVT01034492001 EMB3003 Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.03 OrthoFinder output from all 47 species
Gb_08969 LTA2, PLE2 dihydrolipoamide acetyltransferase component E2 of... 0.04 OrthoFinder output from all 47 species
LOC_Os08g33440.1 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.05 OrthoFinder output from all 47 species
LOC_Os12g08170.1 EMB3003, LOC_Os12g08170 dihydrolipoamide acetyltransferase component E2 of... 0.05 OrthoFinder output from all 47 species
Len_g18518 EMB3003 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06073 EMB3003 EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10234164g0010 LTA2, PLE2 dihydrolipoamide acetyltransferase component E2 of... 0.06 OrthoFinder output from all 47 species
MA_10433674g0010 EMB3003 dihydrolipoamide acetyltransferase component E2 of... 0.04 OrthoFinder output from all 47 species
Mp4g18690.1 EMB3003 dihydrolipoamide acetyltransferase component E2 of... 0.05 OrthoFinder output from all 47 species
Ppi_g43716 EMB3003 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g48678 LTA2, PLE2 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19115 No alias EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31116 LTA2, PLE2 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12435 EMB3003 EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004154_P002 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.09 OrthoFinder output from all 47 species
Zm00001e018405_P001 EMB3003, Zm00001e018405 dihydrolipoamide acetyltransferase component E2 of... 0.09 OrthoFinder output from all 47 species
Zm00001e022439_P001 LTA2, PLE2,... dihydrolipoamide acetyltransferase component E2 of... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008837 diaminopimelate epimerase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016842 amidine-lyase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
MF GO:0047661 amino-acid racemase activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004167 PSBD 183 218
IPR000089 Biotin_lipoyl 40 111
IPR001078 2-oxoacid_DH_actylTfrase 248 467
No external refs found!