Solyc11g013280.1.1 (SRA1, KLK, PIR,...)


Aliases : SRA1, KLK, PIR, ATSRA1, PIRP, PIR121, Solyc11g013280

Description : component PIROGI of SCAR/WAVE ARP2/3-activating complex


Gene families : OG0005627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005627_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g013280.1.1

Target Alias Description ECC score Gene Family Method Actions
Als_g07499 SRA1, KLK, PIR,... component *(PIROGI) of SCAR/WAVE ARP2/3-activating... 0.03 OrthoFinder output from all 47 species
Aspi01Gene29478.t2 SRA1, KLK, PIR,... component *(PIROGI) of SCAR/WAVE ARP2/3-activating... 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010017 SRA1, KLK, PIR,... component *(PIROGI) of SCAR/WAVE ARP2/3-activating... 0.03 OrthoFinder output from all 47 species
Cba_g18098 SRA1, KLK, PIR,... component *(PIROGI) of SCAR/WAVE ARP2/3-activating... 0.02 OrthoFinder output from all 47 species
Gb_18362 SRA1, KLK, PIR,... Protein PIR OS=Arabidopsis thaliana (sp|q5s2c3|pir_arath : 154.0) 0.03 OrthoFinder output from all 47 species
Mp5g00460.1 SRA1, KLK, PIR,... component PIROGI of SCAR/WAVE ARP2/3-activating complex 0.02 OrthoFinder output from all 47 species
Ore_g15062 SRA1, KLK, PIR,... component *(PIROGI) of SCAR/WAVE ARP2/3-activating... 0.02 OrthoFinder output from all 47 species
Smo160351 SRA1, KLK, PIR,... Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030833 regulation of actin filament polymerization IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR008081 Cytoplasmic_FMR1-int 399 1246
IPR009828 CYRIA/CYRIB_Rac1-bd 155 215
No external refs found!