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  5. Solyc11g008470.2.1

Solyc11g008470.2.1 (MDF, DOT2, Solyc11g008470)


Aliases : MDF, DOT2, Solyc11g008470

Description : SART-1 family protein DOT2 OS=Arabidopsis thaliana (sp|q9lfe0|dot2_arath : 378.0)


Gene families : OG0004143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g008470.2.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00135160 MDF, DOT2,... SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT5G16780 MDF, DOT2 SART-1 family 0.07 OrthoFinder output from all 47 species
Adi_g055487 MDF, DOT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03521 MDF, DOT2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.14G049800.1 MDF, DOT2,... not classified & original description: pacid=50634914... 0.08 OrthoFinder output from all 47 species
Cre03.g156100 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dcu_g07125 MDF, DOT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035173001 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_00217 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_12198 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g30730.2 MDF, DOT2, LOC_Os02g30730 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Mp8g09130.1 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Ore_g19696 MDF, DOT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41936 MDF, DOT2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g02345 MDF, DOT2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14031 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo404232 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Zm00001e018582_P001 MDF, DOT2, Zm00001e018582 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
InterPro domains Description Start Stop
IPR005011 SNU66/SART1 13 347
IPR005011 SNU66/SART1 357 407
No external refs found!