1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g086460.2.1

Solyc10g086460.2.1 (ACT4, Solyc10g086460)


Aliases : ACT4, Solyc10g086460

Description : actin filament protein


Gene families : OG0000179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g086460.2.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00109910 ACT7,... Cytoskeleton.microfilament network.actin filament protein 0.03 OrthoFinder output from all 47 species
AT2G37620 AAc1, ACT1 actin 1 0.04 OrthoFinder output from all 47 species
AT2G42090 ACT9 actin 9 0.04 OrthoFinder output from all 47 species
AT2G42100 No alias Actin-like ATPase superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G46520 ACT12 actin-12 0.03 OrthoFinder output from all 47 species
AT3G53750 ACT3 actin 3 0.06 OrthoFinder output from all 47 species
AT5G59370 ACT4 actin 4 0.03 OrthoFinder output from all 47 species
Adi_g104501 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06578 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12310 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12311 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06451 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16802 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10476 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19075 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52378 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52379 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02831 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13847 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05752 AAc1, ACT1 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10571 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12151 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G030400.1 ACT7, Ceric.01G030400 actin filament protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G073000.1 ACT7, Ceric.11G073000 actin filament protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.22G030400.1 ACT7, Ceric.22G030400 actin filament protein & original description:... 0.03 OrthoFinder output from all 47 species
Cre13.g603700 ACT11 Cytoskeleton.microfilament network.actin filament protein 0.02 OrthoFinder output from all 47 species
Dcu_g24197 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09328 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28992 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026580001 ACT7 Cytoskeleton.microfilament network.actin filament protein 0.03 OrthoFinder output from all 47 species
Gb_04045 ACT11 actin filament protein 0.04 OrthoFinder output from all 47 species
Gb_08812 ACT7 actin filament protein 0.03 OrthoFinder output from all 47 species
Gb_34329 AAc1, ACT1 actin filament protein 0.01 OrthoFinder output from all 47 species
LOC_Os03g50885.1 ACT11, LOC_Os03g50885 actin filament protein 0.02 OrthoFinder output from all 47 species
LOC_Os12g44350.1 ACT11, LOC_Os12g44350 actin filament protein 0.05 OrthoFinder output from all 47 species
Lfl_g06957 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22569 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g23151 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427661g0030 ACT7 actin filament protein 0.02 OrthoFinder output from all 47 species
MA_854773g0010 ACT7 Actin OS=Gossypium hirsutum (sp|o81221|act_goshi : 242.0) 0.02 OrthoFinder output from all 47 species
Mp6g11010.1 ACT7 actin filament protein 0.03 OrthoFinder output from all 47 species
Msp_g10222 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30320 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06176 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09339 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03053 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08918 ACT7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46457 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001863 ACT7 actin filament protein & original description: CDS=1-1344 0.04 OrthoFinder output from all 47 species
Smo178381 ACT7 Cytoskeleton.microfilament network.actin filament protein 0.04 OrthoFinder output from all 47 species
Solyc03g078400.3.1 ACT7, Solyc03g078400 actin filament protein 0.04 OrthoFinder output from all 47 species
Solyc11g005330.2.1 ACT7, Solyc11g005330 actin filament protein 0.04 OrthoFinder output from all 47 species
Spa_g02411 AAc1, ACT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17579 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20294 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22103 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22438 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22439 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54123 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06536 ACT7 acTin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13908 ACT7 acTin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20683 ACT7 acTin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41495 ACT11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005489_P002 ACT11, Zm00001e005489 actin filament protein 0.02 OrthoFinder output from all 47 species
Zm00001e009080_P001 ACT7, Zm00001e009080 actin filament protein 0.02 OrthoFinder output from all 47 species
Zm00001e012159_P001 ACT11, Zm00001e012159 actin filament protein 0.03 OrthoFinder output from all 47 species
Zm00001e024651_P001 ACT7, Zm00001e024651 actin filament protein 0.01 OrthoFinder output from all 47 species
Zm00001e027663_P005 ACT7, Zm00001e027663 actin filament protein 0.04 OrthoFinder output from all 47 species
Zm00001e029682_P001 ACT7, Zm00001e029682 actin filament protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!