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  5. Solyc10g085590.1.1

Solyc10g085590.1.1 (ELC, ATELC, Solyc10g085590)


Aliases : ELC, ATELC, Solyc10g085590

Description : component VPS23 of ESCRT-I complex


Gene families : OG0001430 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001430_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g085590.1.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AT3G12400 ELC, ATELC Ubiquitin-conjugating enzyme/RWD-like protein 0.05 OrthoFinder output from all 47 species
Aev_g37448 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.02 OrthoFinder output from all 47 species
Ala_g06410 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Als_g47597 ELC, ATELC not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13038 ELC, ATELC not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70200 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23501.t1 ELC, ATELC,... component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g015948 ELC, ATELC not classified & original description: CDS=1-867 0.03 OrthoFinder output from all 47 species
Azfi_s1420.g102854 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.04 OrthoFinder output from all 47 species
Cba_g08413 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.05G091900.1 ELC, ATELC,... not classified & original description: pacid=50578251... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021374.12 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g15170 ELC, ATELC not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03610 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Ehy_g18634 ELC-Like component *(VPS23) of ESCRT-I complex & original... 0.02 OrthoFinder output from all 47 species
Ehy_g26363 ELC, ATELC not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018153001 ELC, ATELC Protein ELC OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
LOC_Os02g58640.1 ELC, ATELC,... component VPS23 of ESCRT-I complex 0.08 OrthoFinder output from all 47 species
Lfl_g01028 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.04 OrthoFinder output from all 47 species
Lfl_g25010 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.02 OrthoFinder output from all 47 species
Msp_g11096 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.04 OrthoFinder output from all 47 species
Nbi_g39791 ELC, ATELC EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ppi_g01068 ELC, ATELC component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000902 ELC-Like component *(VPS23) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021324 ELC, ATELC not classified & original description: CDS=242-1315 0.03 OrthoFinder output from all 47 species
Solyc09g065770.1.1 Solyc09g065770 Protein ELC-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g25951 ELC, ATELC not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR008883 UEV_N 36 156
IPR017916 SB_dom 319 381
No external refs found!