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  5. Solyc10g081890.2.1

Solyc10g081890.2.1 (Solyc10g081890)


Aliases : Solyc10g081890

Description : anion channel (QUAC/ALMT)


Gene families : OG0000412 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000412_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc10g081890.2.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00044700 evm_27.TU.AmTr_v1... Solute transport.channels.QUAC/ALMT anion channel 0.02 OrthoFinder output from all 47 species
AT2G17470 No alias Aluminium activated malate transporter family protein 0.04 OrthoFinder output from all 47 species
Ala_g02458 ALMT9, AtALMT9 anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24216 ATALMT12, ALMT12 anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07326 ALMT9, AtALMT9 anion channel *(QUAC/ALMT) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g62883 ATALMT12, ALMT12 anion channel *(QUAC/ALMT) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06544 ALMT9, AtALMT9 anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.33G034800.1 Ceric.33G034800 anion channel *(QUAC/ALMT) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g28272 ALMT9, AtALMT9 anion channel *(QUAC/ALMT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019627001 No alias Solute transport.channels.QUAC/ALMT anion channel 0.02 OrthoFinder output from all 47 species
GSVIVT01037569001 No alias Solute transport.channels.QUAC/ALMT anion channel 0.06 OrthoFinder output from all 47 species
Gb_16082 No alias anion channel (QUAC/ALMT) 0.03 OrthoFinder output from all 47 species
Gb_21420 No alias anion channel (QUAC/ALMT) 0.02 OrthoFinder output from all 47 species
LOC_Os02g49790.1 ALMT9, AtALMT9,... anion channel (QUAC/ALMT) 0.03 OrthoFinder output from all 47 species
LOC_Os04g34010.1 LOC_Os04g34010 anion channel (QUAC/ALMT) 0.03 OrthoFinder output from all 47 species
LOC_Os04g47930.1 LOC_Os04g47930 anion channel (QUAC/ALMT) 0.03 OrthoFinder output from all 47 species
LOC_Os06g22600.1 LOC_Os06g22600 anion channel (QUAC/ALMT) 0.02 OrthoFinder output from all 47 species
Len_g00694 ALMT9, AtALMT9 anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g30399 No alias anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g44796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10548 ALMT9, AtALMT9 anion channel *(QUAC/ALMT) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10124 ALMT9, AtALMT9 anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g061100.4.1 ATALMT12,... anion channel (QUAC/ALMT) 0.03 OrthoFinder output from all 47 species
Zm00001e008168_P001 Zm00001e008168 anion channel (QUAC/ALMT) 0.05 OrthoFinder output from all 47 species
Zm00001e037031_P002 Zm00001e037031 anion channel (QUAC/ALMT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015743 malate transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR020966 ALMT 20 370
No external refs found!